Vigna angularis (adzuki bean): 108345594
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Entry
108345594 CDS
T04660
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345594
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108345594
Factors involved in mRNA localization
Other mRNA localization factors
108345594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
GlgX_C
Motif
Other DBs
NCBI-GeneID:
108345594
NCBI-ProteinID:
XP_017439699
UniProt:
A0A0L9VLS7
LinkDB
All DBs
Position
6:27407242..27427644
Genome browser
AA seq
1278 aa
AA seq
DB search
MMAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTK
ALNQLNVLSQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLRE
IQRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPND
FTWYKRTFTQVSGQWQDSDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLI
VFVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLVNIFKNEAV
IPAFPDLHLSPASILKELSTYFPKFSSQTRLLTLPAPHELPPREAQEYQRHYLIINHIGA
IRAEHDDFVIRFASAMNQLLLLKSTDGSDIEWSKEVKGNMYDMIVEGFQLLSKWTARIWE
QCAWKFSRPCKDPSESFSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQRCDTLVADA
LWETIHAEVQDFVQNTLAIMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSQ
HGGEDSKANIFYPRAVAPTTAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQ
LETFFYKLGFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDCVL
ESPNSGLLESVLMPFDIYNDSAQQALVLLKQRYLYDEIEAEVDHCFDIFVTKLCEIIFTY
YKSWAASELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERINKA
FRENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSIDSFSLMLNEMQENISLV
SFSSRLASQIWSELQTDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSAKPSFYCGTQDLN
SAHQSFARLHSGFFGIPHMFSIVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQESL
PKSIGLLPFDGGVTGCVRLVKEHLNWETKSELKAEVLHGLKEIGSVLYWMGLLDIVLREK
DSMDFMQTAPWLGLLPGGDGPLVTSQDGEHSPVVSLFKSTASAMVSYPGCPSPSSFHIMA
KQAEAADLLYKANLNSGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITISKDFYRIYS
GLQIGYLEESAQVSSNSHDRLGDSIAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAV
SVMQTHKNSQFSVQGWEALLEAMKKARRLNNHVFSMLKARCPLEEKTACAIKQSGAPIHR
IKFDNTVSAFETLPQKGS
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtaccagtagaggaagccattgctgctctatccacattctctctcgaggat
gaacaaccggaggtgcagggacctggagtgtgggtttcaactgagcgaggtgcaacggaa
agtccaatagagtacagcgatgtctctgcttaccgactatctctatcagaggacacaaaa
gctctcaatcagctgaatgtccttagccaagagggaaaggagatggcatcagtgctttac
acttatcgcagttgcgtcaaagcacttcctcagctacctgattctatgaagcaaagtcaa
gctgacctatacttggagacatatcaagttctggatttggaaatgagtcgtctgcgtgaa
attcagcgatggcaagcatcagcttcttcaaagttagctgctgacatgcaacgtttttcc
aggcctgaacgacgcattaatggccctacaatatctcacttgtggtctatgttgaagttg
cttgatgttttggtgcaacttgatcaccttaaaaatgctaaggcaagcataccaaatgac
tttacatggtataaaaggacttttacacaagtcagtggtcagtggcaagacagtgattca
atgcgggaggaattagatgatttgcagattttcttgagcacaagatgggctattttgttg
aatttgcatgtggagatgttccgagtgaacaatgtagaagacattcttcaagttctcata
gtctttgtagtagagtctttagaattggactttgcccttctctttccagagcgccacatt
cttttgcgtgttttgcctgttcttgttgtcctagtgacatcatcagagaaagatagcgag
tctctgtacaagagggtgaaaatcaacagactggtcaatatatttaagaatgaggcagtc
attcctgcctttccagatctgcatttgtctcctgcttcaatattaaaggaattatcaaca
tactttcctaagttttcttcccaaactcgccttctcacacttccggcgccacatgagctt
ccacctcgtgaggcacaagaatatcagagacattatttgatcataaatcatattggagcc
atccgtgctgagcatgatgattttgtaattcgatttgcttctgcaatgaatcagctgtta
ttgttgaagtcaactgatggttctgatattgaatggagcaaggaagtcaaggggaacatg
tatgatatgattgttgaaggttttcagctattaagcaaatggactgcacgcatatgggaa
caatgcgcatggaaattttctcgaccatgcaaagatccatccgaatcattttctgactat
gaaaaggtggtaagatataattacagtgcggaagaaaggaaagcactggttgaacttgtg
agctacataaagagtgttggatctatgatgcagcggtgtgatactttggttgctgatgct
ttatgggaaacaatacatgctgaagtccaggattttgtccaaaacacattagctattatg
ttgcggactaccttcagaaagaagaaggacctctctaggattctttcagatatgcggacc
ctttcagctgattggatggctaatacaaacaaatcagaatctgagttacagtcctcacag
catggaggtgaagatagcaaagcaaacatattttatccaagagcagttgccccaactacc
gctcaggtccactgcttgcagttcttaatatatgaggtggtttctggtggtaatcttagg
aggccaggtggactctttggcaatagtggctcagaaatcccagttaatgatttaaaacag
ctggagacatttttttacaagcttggttttttccttcatattttagactactcagcgact
gttgcaacattgacagatcttggtttcttatggtttagagaattctatttagagtcttca
cgagtcattcagtttccaattgaatgctctcttccctggatgttggtggattgtgtactt
gagtcaccaaattctggtcttctcgagagtgttctgatgccttttgacatctataatgat
tcagctcagcaagccttggtgttgctgaagcaacgttatctatacgatgaaattgaggct
gaggtggatcattgttttgatatatttgttacaaaattgtgtgaaatcattttcacatat
tacaaaagttgggcagcaagtgaattacttgatccttcattcctctttgcttcagacaat
gcagaaaagtatgctgtgcaacccataaggctcaatatgctgcttaaaatgactagagtg
aagcttcttggaaggatgattaatttgcgtagtttgatcactgaacggattaacaaggct
ttccgtgaaaatattgagtttttgtttgatcgatttgaatgccaggatctttgtgccata
gtggaattagagaagttgttggatgtcttaaagcattcccatgaactactgtctagagat
ctttctattgactctttcagtctcatgttgaatgagatgcaagagaacatctcccttgta
tcattttctagtcgactggcctcacagatttggtcagagttgcaaaccgattttttgcca
aatttcattctctgcaatactactcaacgttttatcagatcatcaagaactgttcctgtt
caaaagccatctgtaccctctgctaagcctagcttctattgtggtactcaagatttgaat
tctgcccatcaaagttttgcacgattacatagtggattctttggaataccgcacatgttt
tctattgttcgacttttgggatcccgatcattaccttggcttattagagctcttcttgat
cacatatcaaacaagattactttgcttgaaccaatgattacaggattacaagaatctttg
ccaaaatcaattgggcttcttcctttcgacggaggtgtgacaggttgtgtgagacttgtt
aaggaacatcttaactgggagacgaaatcggaactgaaagctgaggttcttcatggctta
aaagagattggaagtgtattatattggatggggcttctagatattgtgttgagagaaaag
gattctatggatttcatgcaaactgctccttggctgggcttgcttcctggaggagatggt
ccattagtgacttcccaagatggtgaacacagccctgttgttagtctctttaaatcaaca
gcttctgcaatggtttcataccctggttgcccatcgccttcctctttccatattatggca
aaacaagcagaagctgcagatcttttatacaaggctaacttgaattctggaagtgtgctg
gagtatgcacttgccttcactagtgctgcgttggataaatattgtagcaaatggagtgct
gcacccaaaacaggcttcattgacattacaatttccaaagacttctaccgaatatacagt
ggtctccaaattggatacttggaagagtctgctcaagtgtcatcaaatagtcatgacagg
ctgggagattcaattgcctgggggggctgcactattatttatttgcttgggcagcagctg
cattttgagctctttgacttttcgtatcagatcctcaatatcgcagaagtggaggctgta
tctgttatgcaaacacataagaactcacaattttctgtccagggatgggaagccttattg
gaagcaatgaaaaaagctaggagattaaataaccatgtattctctatgcttaaagcacgt
tgtcccttagaagaaaagacagcttgtgctattaagcaaagtggtgctccaatacatcgt
ataaaatttgacaacacagtttcagcatttgaaacactgccacagaaaggttcttag
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