Vigna angularis (adzuki bean): 108345637
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Entry
108345637 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108345637 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108345637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345637
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108345637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
108345637
NCBI-ProteinID:
XP_017439769
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Position
1:56041860..56049508
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AA seq
789 aa
AA seq
DB search
MPRKVSYGLDLDDDYYYDDDYDDYDYDDVDADGHGGPDTKQETIRPGLWQCSICTYDNDE
SMAFCDICGVVRRPSHNIGTSDSSKIAEDIHKIPGASKLARSLFQSLPQQIPKEVILFPK
LGDGFLTDGSIFYKLENVRGEFHEIHKDFSTQSHPHLNIDPFKFDVPSPDDVIFTGLHSS
KVGLKDNVTNKKSSKLSSSIREINELSVQSNAESSDNLSSLTQKSRKDSSAQSKLSKNVA
TGLQASGKPSNSLSESLPKDKGENINKINSLKSGTIDIQLSKEKSGSLSALSKVKESDKN
SFHSIKDGKVESISSNFNNMTADVRSGNSDNANAKKPHSRVSYKPEKWMLPQQAEDTLTQ
LNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEER
ERGITMTVAVAYFDTKKYHVVLLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGM
DGNKGQTREHAQLIRSFGVDRVIVAVNKMDAVAYTQDRFDFIRQHLGAFLHSCGFKDSSL
SWIPMSAMENQNLVASPSDPRFKNWYNGPYLLDAIDSLQAPTREFSKPLLMPVCDVIKST
TLGQVSACGKLEAGALRSGSKVLVMPSAVLGTVRSLERDSNACTVARAGDNVAVTLQGVD
GNQVMAGDVLCHPDFPVAAARHLELKVLVLDGASPILVGTQLEFHIHHAKEPARVSRILS
VLDPKTGKVTKKSPRCLTAKQSAVMEVALNESVCVVEFSSCKALGRVSLRSMGRTIAVGV
VTRIIEDEG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaagtcagttatggactcgatttggacgacgactattactacgatgatgat
tatgacgactatgattacgatgatgtcgatgcagatggtcatggaggacctgatacaaag
caagagaccatcaggccaggtctttggcaatgctccatttgcacttatgacaatgacgag
agtatggcattttgtgatatttgtggtgttgtacgaagaccctcgcataacattggaact
tccgacagtagcaaaatagctgaagacatacacaaaattcctggagcatccaagttggcc
aggtctctttttcaatcattaccacaacagattcccaaagaggttatattatttccaaag
ctgggtgatggtttcctgacagatggcagtatcttctacaagcttgagaatgtccgggga
gaatttcatgaaattcataaagattttagtacacagagtcatccacacctaaacatagat
cctttcaagtttgacgttccatctcctgatgatgtcatttttactggtctacattcttcc
aaagtgggattgaaagacaatgttacaaacaaaaaaagttcgaaactttcatcaagcatc
agagagataaatgaactctctgttcaatcaaatgctgaaagttcagacaacttatcttcc
ttaacgcaaaagagcaggaaggatagttcagcccagagcaagctttcaaaaaatgtagca
actggtctgcaagcaagtggtaaaccttcaaacagcttgtcagaatctctgccaaaagac
aaaggtgaaaatattaataaaataaactctttgaaaagtggtacaattgatattcaattg
agcaaagagaagtctggtagtttgtctgcactgtcaaaagtcaaggaaagtgataagaat
agtttccattctatcaaagatggaaaagtggaaagtatttccagcaatttcaacaacatg
actgctgatgtaagatctggaaattcagacaatgctaatgctaagaaacctcattcacgt
gtttcttataagccagaaaaatggatgctacctcaacaagctgaagatacattgactcag
ctgaatcttgcaattgttggccatgttgattctggaaaatcaaccctatctggtaggtta
ctgcacctattgggacggatttcccagaaagagatgcacaagtacgaaaaggaggccaag
ttacagggcaagggatcttttgcttatgcttgggcacttgatgaaagctctgaagaaaga
gaaaggggaataactatgactgttgcggttgcttattttgacaccaagaaatatcatgtt
gttttgctcgactctcctggccataaagattttgtcccgaacatgatttctggggcaaca
caagcagatgctgcaatccttgttatagatgcctcacttggttcatttgaagctggtatg
gatggcaacaaagggcaaacaagggagcatgcacaacttatcagaagttttggtgttgat
cgggtcatagttgctgtaaataagatggatgctgttgcgtacacccaggatcgatttgat
tttataaggcagcatctgggagcttttctacactcatgtggtttcaaagattcttctcta
tcttggattcctatgagtgctatggaaaatcaaaatttggtggcatccccttctgatcct
cgtttcaaaaactggtataatggaccttatctgttagatgcgattgactctctccaagct
cctactagagaattttcaaaacctctactaatgccagtatgtgatgtcatcaaatcaact
acgcttggacaggtatctgcttgtggtaaactggaagcaggagctcttcggagtggatct
aaggtcttagttatgccttcagctgtattgggaacggtacgctcattggagcgtgactct
aatgcctgcactgttgcaagagctggagataatgtagctgtaacattgcaaggtgtcgat
ggaaatcaggtgatggcaggagatgtactatgccatcctgactttcccgttgcagctgct
aggcatttggagttgaaagtgctagtgttggatggtgcaagtccaatattggtgggcaca
cagttggagtttcatatacaccatgcgaaggaacctgctagagtttcaagaatattgtca
gtacttgatcccaagactggtaaggtgaccaagaagtcgcctcgatgtctcactgcaaag
caaagtgcagtaatggaggtggctttgaatgagtctgtctgtgtggtagagttctctagt
tgtaaagctcttggaagggtgtccctaagatccatgggaagaacaattgctgttggcgtt
gtaacaagaataattgaggacgaaggttaa
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