Vigna angularis (adzuki bean): 108345661
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Entry
108345661 CDS
T04660
Name
(RefSeq) probable ubiquitin conjugation factor E4 isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04120
Ubiquitin mediated proteolysis
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108345661
04120 Ubiquitin mediated proteolysis
108345661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108345661
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108345661
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
U-box type E3
108345661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
108345661
NCBI-ProteinID:
XP_017439807
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All DBs
Position
8:6166604..6175987
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AA seq
1042 aa
AA seq
DB search
MAATKPQRTPQEVEDIIIRKIFLVSITEIEKTSATDSRIVYLELTAAEILSEGKELRLSR
DSMERVLIDRLSGDFSSTTGEASETPFQYLIGCYHRAHEEGKKIANMKDKSLRSEMEAVV
RQAKKLCVNYCRIHLANPELFPSRNSAGTDAKSPLLPLIFAEVGGGSVFGGGGGGVKSPP
GFLEELFRDPDFDSLDLILKGLYEELRGSVMNVSALGNFQDSLRALLYLVRFPFGAKSLV
NHEWWIPKGVYVNGRAIEMTSILGPFFHISALPDQAFFKGQPDVGQQCFSDASTRRPADL
LSSFSTIKTVMNNLYDGLAEVMLILLKSTDTRERVLEYLAEVININASRAHIQVDPITCA
SSGTFVNLSAVMLRLCEPFLDANLTKRDKIDAKYVHYSNRLKISGLTALHASSEEVAEWL
NSKNPAKTGSTNQYNDDQKRLQQSQEASSSGSNNAGELSNENSAPAEKTKYSFICECFFM
TARVLNLGLLKAFSDFKHLVQDISRCEDALSTLKAMQERAPTPQAELDINRLEKEMELYS
QEKFCYEAQILRDNTLIQNALSFYRLMIVWLVGLVGGFNMPLPPTCPMEFATMPEHFVED
AMELLIFASRIPKALDGVVLDEFMNFIIMFMASPEFIKNPYLRAKMVEVLNCWMPRRSGS
SATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSH
RNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLKKILELKELEAEMSNTVEWEQRPVQ
ERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQ
LVGPQRKSLSLKDPEKYEFRPKHLLKQIVHIYVHLARGDTNSIFPSVISRDGRSYNDQLF
SAAADVLHRIGEDGRIIQEFIQLGAKAKVAASEAMDAEATLGEIPEEFLDPIQYTLMKDP
VILPSSRTTVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNVELKARIEEFVRSQEMKKHG
EGLSLQSNKDTIQTTNGEMLID
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaaaccccaacgcactccacaggaagtggaggacattatcatccgcaaa
atcttcctcgtctccataacagaaatcgagaagacaagcgcaacggattcaagaatcgtg
tatttggaactaacagctgcggagattctcagcgaagggaaggagcttcgcctctcgcgg
gattcaatggagagggttttgattgaccgtctctccggagacttttcttccaccaccggt
gaagccagtgagacaccgttccagtacctcatcggatgctaccaccgggcgcacgaggag
gggaagaaaattgcgaacatgaaggacaagagcttgcgctcggagatggaggcggtggtg
aggcaggctaagaagctctgtgtcaactactgccggattcatttagccaatcccgagctc
tttccgagccggaattcggcgggtaccgacgccaaatcgcctctactgccgctgattttt
gcggaggtaggcggcggaagcgtgttcgggggcggcggtggcggggtcaagagtccgccg
gggtttctggaggagcttttcagggacccggactttgacagcttggacctgattctgaag
gggttgtatgaagagttgagagggagcgttatgaatgtgtctgctctggggaattttcag
gattctctgagggctttgttgtatttggttaggtttccctttggtgccaagtcgcttgtg
aatcacgagtggtggattcccaaaggggtttatgtgaatggccgtgctattgaaatgacc
agcattttgggtccgtttttccatattagtgctcttcctgatcaggcgtttttcaagggc
cagcctgatgttgggcaacagtgtttttctgatgcatcaactaggcgaccagctgatttg
ttatcttcattttcgactattaaaactgtcatgaacaacttatatgatgggctagctgaa
gttatgctcatccttcttaaaagtacagatactcgtgaaagagtacttgagtatcttgcg
gaggtgatcaatataaatgcatccagggctcatatacaggttgaccctattacttgtgca
agttcaggcacctttgtaaatctcagtgctgtcatgcttcgtctatgtgagccattttta
gatgcaaatttaacaaaaagggataaaattgatgcaaaatatgtacattactcaaatcgc
ttgaagataagtgggttgactgctcttcatgcatcatcagaagaagttgctgaatggctt
aatagtaaaaacccagctaagactgggtcaaccaatcaatataatgatgatcagaaacgc
ttacaacaatcccaagaggccagtagttctggtagtaataatgctggtgagctctcaaat
gaaaattctgcaccagctgaaaagacgaaatattcatttatttgcgaatgcttctttatg
accgcaagagtgctcaacttgggccttttaaaagcattttctgacttcaaacatttagtt
caggatatatctaggtgtgaagatgctctatccacacttaaagccatgcaggagcgggca
cccactcctcaggcagaattggatataaatcgacttgagaaagaaatggagttgtattca
caggaaaaattttgttatgaagctcagattttgagggataacacacttattcaaaatgca
ctttctttctaccgcttgatgattgtttggttggttggcttggtgggtggtttcaatatg
cctctaccaccaacttgccctatggaatttgctaccatgcctgaacattttgtggaagat
gccatggaacttctaatatttgcttcccggattccaaaggccttagatggagttgtgctg
gatgaatttatgaattttataattatgttcatggccagccctgaatttattaaaaaccca
tacctgagagcaaagatggttgaagttctgaactgctggatgcctcgtaggagtggctca
tctgcaacagccactctatttgaaggccaccaactctctcttgagtatcttgtgaggaat
cttcttaaactttatgttgacattgagttcactggttctcacacacagttctatgacaag
tttaatatccgccacaatattgcggaactcctcgaatacctgtggcaagtccctagtcat
cgaaatgcttggagacagattgctaaggaggaggaaaagggtgtctatctgaatttcttg
aactttctgatcaatgatagtatttatcttctggatgaaagtttgaaaaaaattcttgag
ctaaaagaattggaggctgagatgtctaatacggttgagtgggagcaacgaccagttcaa
gagaggcaggagaggacccggttattccattctcaagaaaatatcattcgaatagatatg
aagttggcaaacgaagatgtgagcatgcttgcatttacttcagaacagattactgctccg
ttcctacttcctgagatggttgagagagtggctagcatgctcaattacttcctgctgcaa
ttggttggtccgcaaagaaaatcacttagtctgaaggatcctgagaaatatgaatttcgt
ccaaagcatttactaaaacagattgtgcacatatacgttcatctggctaggggtgacacg
aattccatcttcccatctgtcatctcaagggatggtcgatcatacaatgatcagttgttt
agtgctgcagccgatgtccttcacagaattggtgaggacgggagaattatacaggaattt
attcaacttggtgctaaagctaaagttgctgcttcggaggccatggatgctgaagctact
ctaggagaaataccggaggaattccttgatccgattcaatacactttgatgaaggatcca
gtaattttgccttcttcaaggaccacggttgatcgtcctgttattcagaggcatcttctt
agtgatagtactgaccccttcaaccgttctcatcttactgcggatatgttgattcccaat
gttgagctaaaagcaagaattgaggagtttgtgaggtctcaagaaatgaaaaaacacggt
gaagggctaagcctacagagtaacaaggacacaattcagactacaaatggggaaatgttg
attgattag
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