Vigna angularis (adzuki bean): 108345683
Help
Entry
108345683 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108345683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108345683
03009 Ribosome biogenesis [BR:
var03009
]
108345683
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108345683
Spliceosome [BR:
var03041
]
Complex A
U1 snRNP components
U1 related factors
108345683
Complex B
108345683
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Helicases
108345683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108345683
NCBI-ProteinID:
XP_017439846
UniProt:
A0A0L9VPL9
LinkDB
All DBs
Position
8:1163664..1169241
Genome browser
AA seq
763 aa
AA seq
DB search
MAATATASSMGPRYAPPDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSSAAPPKS
SSVPSSSVQVQHTSQGSQRGRSPDFSDRYDRNGSGGSNDASRNNQSSKGGSYSSHSVPTG
TNAAANVSYSVKGHGASDAAAVLSPESYRSRHEITVTGDNVPPPLASFGSSGFPPEVLRE
VQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFVHLKRCGNNSKMGPT
ALVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLN
DILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKI
AADLLVKPVQVNIGNVDELVANKSITQHVEVLPLMEKQRRLEHILRSQDQGSKIIIFCST
KKMCDQLARTLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIR
VVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYATDLIKVLEGANQKVPPEL
RDMSSRGGSGMGRSRRWGSGGRGGRSDSGYGGRNNDSGYGGRGGDSNYGARGNASSGRGG
RGFDYDSQRNDRGLSPDKGSKWSDRYKSVNRERSRSPDRAALPQHSQSSSFHKAMMERGG
WGDSDRNKSSNRDRSRSPSPYRQERTTAVRERSPVHSFHRSMMGQSQSSPPRQRARSPYR
NSSPSQGGGRSYNSPPKEWGGNGGEVEEGMIPEEDGMIGQGGD
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacagcaactgcctcttcaatgggtccgcggtatgcaccaccagatccgaca
ctccctaaaccatggaagggtcttgtggatggcaagaccgggtatctttacttttggaat
cccgagaccaatgtcacccagtatgagaggccatcgagctcagctgccccaccaaagtcc
tcttcagtgcctagctcttctgtccaggttcaacatacgtctcaagggtcgcaacgtggt
cgtagtcctgatttcagtgataggtatgatagaaatggcagtggtgggtcaaatgatgct
tcacggaataatcagagttccaaaggtggaagttacagttctcatagtgtgccaactgga
acaaatgctgctgccaatgttagttattctgtcaaaggtcatggggcatcggatgctgca
gctgtgctatctcctgagtcttatcgaagtcggcatgaaataactgtgactggagacaat
gtgccaccgcctcttgcttcatttggttctagtggctttccaccggaggttctgagagag
gtacaaaatgctggtttctcagccccaactccaattcaggcacagtcatggcccattgct
cttcaaagtagagatatagttgccattgcaaaaacaggctcagggaaaacattgggatat
ttaattccagcatttgttcacctcaagcgctgtggtaataactccaaaatgggccccact
gcattggtactttcaccaacaagggagttggcgacacaaatacaagatgaggctgtgaag
tttgggaaatcttcaagaatttcttgtgcatgtttgtatggaggagcacccaagggtcct
caactcagagacattgaccggggagcagatattgtggtagccactcctggtcgcttgaat
gatattcttgagatgagaagaattagtcttcatcaggtctcttacctggtgctagatgag
gcagaccggatgctggatatgggtttcgaacctcaaattaggaaaattgttaatgaggtg
cctaatcgcaggcaaacactcatgtttactgcaacttggccaaaggaggttaggaaaatt
gcagctgatctactggtcaaacctgtccaggtgaacattggcaatgtggacgagcttgtt
gctaacaagtcaattactcagcatgttgaagtgttgcccctgatggagaaacagagacgt
ctggaacatattttacggtcacaggatcaaggatcaaagataatcatattctgttctacc
aagaaaatgtgtgatcaacttgctcgaactctgacacgtcagttcggagctgctgctata
catggggataaatcccaggctgagagggatcacgtgttgagtcagtttcgaactgggagg
tcacctgttcttgtggctacagatgttgctgcccggggactggatatcaaggacattagg
gtggttgtcaattacgacttccccacaggagttgaagactatgttcataggattggaagg
actggaagggctggagccactgggctagcttacactttctttggtgaccaggatgcaaaa
tatgctaccgatctcatcaaagttttggaaggtgcaaatcagaaagtacctccagaactt
cgggatatgtcatcgcggggtggtagtgggatgggaagatccagacgatggggttctggt
ggaagaggtggacgcagtgattctggatatggtggaaggaataatgattcaggatatggt
ggaaggggtggtgattcaaattatggagctaggggaaatgcttcttctgggagaggaggc
cgtggttttgactatgattctcagaggaatgatcggggtctgagtccagacaagggatct
aaatggagtgatcgctacaaaagcgtcaaccgtgaacgtagtcgtagccctgacagggct
gcattacctcaacattcccaaagcagcagttttcacaaggcaatgatggaacgtggtgga
tggggtgatagtgatcgcaataagagctctaacagagatagaagccgcagtcctagcccc
tacagacaggaaaggaccacagcagttcgtgaacgatccccagttcacagttttcatcga
tcgatgatgggacaaagtcaatcatccccaccacggcagcgtgcacgcagtccttatcga
aactcatcaccctcccagggcggtggtaggtcttataatagtcctccaaaagagtgggga
ggcaatggaggagaggtggaggaagggatgattccagaggaagatggaatgataggtcaa
ggtggggattag
DBGET
integrated database retrieval system
