Vigna angularis (adzuki bean): 108345693
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Entry
108345693 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108345693 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345693
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108345693
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
RDD1
DUF5890
TPR_11
Motif
Other DBs
NCBI-GeneID:
108345693
NCBI-ProteinID:
XP_017439865
LinkDB
All DBs
Position
8:32525928..32535360
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AA seq
1157 aa
AA seq
DB search
MEQNPPSPSSDEQKPSLFPLFAASSSLQATTTSSNPQWLSNSSFTTNISVINDAVASQLN
REATLSPPQNDEDDENLAEAHPLPSRYEILESSESDGGGRDRERRKKKKKKKRRRDSSAE
RGGFDGFGSRKSRVRVWADSESNVTKDYYFDSHGDRDNLAFGCIYRMDVARYKPYNPLKL
SGLHTRGLYWWNRSGSLLDRDGDVDALDAKMKSAGRYWSGKYMALERHKSFKRIHLVASK
LSPVTMQDEFIPLSESDAGSSLGAVDSDSVSKTLTPLEESWEDEMLNKTREFNKLTREHP
HDGKVWLAFAEFQDKVAGMQRQKAARLQTLEKKISILEKAVELNPDNEEILLCLLKAYQM
RDSSDVLIARWEKILLQHYGSCKLWREFLLTVQRNFSRFKVSEVRKMYVHAIEALSASCS
KHSRQQVPQGADPSSSDPAIVELELGLVDIFLSLCRFEWQAGYRELATALFQAEIEFSLF
CPPLLLTEQHKHRLFKDFWKSGGARVGEEGALGWSTWLEKEEETRLKVINEELVRESDEG
GWTGWSEPRFKDNEDVTMVENEDNNDMVMEDTQDEEEYNEVETEVDTENLLKMLGIDINN
GDGEVNDTATWIKWSKEESSRDCEQWMPVRRKSDTTSSEAQKTDEDDQLLRVVLYEDVNE
YLFSLRTTEARLSLLSQFIDFYGGKMSQLFCSNSPTMAYSIRSLENLPDSMLEKLKRIHE
VLTKTQNTPTGFSFEFLSDSFSRNADIMKFIRNAVLLCLTVFPRNYMLEEAVLIFEELYV
TKMNSSNSMVTPCRSLAKSLLKSDRQDLLLCGVYARREATYGNIDHARKVFDMALLSVEA
LPGELQSNSPLLYFWYAEVEVANNTAHGSESSCRAIHILSCLGSGTKYIPFKSQASGVQL
LRAHQGFKEKLRTVWSSWVRGIINDQSVALICSAALFEELTTGWDAGIGVLNQAFSMVLP
ERRSQGYHLEFLFNYHIKILQRHKRESSLMKVWESILHGLQIYPFSPELLKDLVEIGHYY
TTSNKLRRILDDCCYKKPSVVLWLFALSFEMFRGGSEHRIRGLFEKALSNDGLSSSVVLW
RCYIMFEMEIANDPSAARRAFFRAIHSCPWSKRLWLDGFLKLNSVLTAKELSDLQEVMRD
KELNLRTDIYEILLQES
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgccgtcgccgtcctccgacgaacaaaagccttctttattccctctg
ttcgcagcctcctcgtctctccaagccaccaccacttcttcgaatcctcaatggctcagc
aactctagcttcaccaccaacatctccgtcataaacgatgccgttgcctcacaactcaat
cgcgaagcgacgctatcgccgccacaaaatgacgaggacgacgaaaatctcgctgaggcg
catcctctcccttctcggtacgagattctcgaatcttctgaatccgacggtggcggaagg
gatagagagaggaggaaaaagaagaagaaaaagaagcggaggcgtgattcatctgcggag
agaggcgggttcgacggtttcggttcgcggaagtcgcgtgttcgagtttgggcggattca
gagagcaacgttaccaaggattattactttgattctcacggagatcgggataatctggcg
tttggatgcatctatagaatggatgttgcccgatacaaaccttacaatcccttgaaactg
tctgggctacacactcgaggtttgtattggtggaataggagcggttcactgttggataga
gatggtgatgttgatgcactagatgctaaaatgaagtctgctggtcgttactggtctgga
aagtatatggctttggagagacataagagctttaagcgtattcatcttgttgcttcaaaa
ttgtctcctgtcactatgcaagatgagtttatacctttatctgaatcagatgctgggtca
tctcttggagctgttgacagtgattctgtctccaaaactttgacacctcttgaagaatct
tgggaagatgaaatgttaaacaaaactagggagttcaacaaactaacaagggagcacccc
catgatggaaaagtttggttagcttttgcagagttccaagataaggttgcagggatgcaa
cggcagaaagctgctcgattgcaaactcttgagaagaagattagcattctggagaaggca
gttgagctcaatccagacaatgaagagatattgctttgccttttgaaagcttatcagatg
agagacagctcggatgtgctaattgcaagatgggaaaagatacttttgcaacactatggt
agttgtaagttgtggagagaattcttgctgacagttcagagaaatttctccagattcaag
gtttcagaggtcaggaagatgtacgttcatgcaattgaagctctatctgcttcatgcagc
aagcactctaggcagcaggtccctcaaggtgctgatccttcttcatcagatcctgcaatt
gttgaattagaacttggtcttgtggatatatttcttagtctttgcagatttgagtggcag
gctggttatagagaattggccactgctttatttcaggctgaaatagagtttagtttgttt
tgtccccctttgctgctcactgagcagcataaacacagactgtttaaggatttttggaaa
agtggtggtgctagagttggggaagaaggggctcttggttggtccacatggttggagaaa
gaggaggaaactaggctaaaagttataaacgaggagctcgtacgtgaaagcgatgagggt
ggttggactggttggtcagaacctaggttcaaggataacgaggatgttactatggttgaa
aatgaagacaacaatgatatggttatggaggatactcaagatgaagaggaatataatgaa
gttgagacagaagttgatactgagaatcttctgaagatgctgggtattgatatcaataat
ggggatggtgaagttaatgacactgccacttggatcaaatggtcaaaagaagagtcttct
agagattgtgagcagtggatgcctgttcgtaggaaatcagatacaacctctagtgaggcg
cagaaaacagatgaggatgaccaactcttgagagttgtattgtatgaagatgtgaatgaa
tacctattctctctacgaacaacagaggctcgactatctttattgtcccaattcattgac
ttctatggtgggaagatgtctcagttgttttgctccaacagcccaacaatggcatacagt
atccgtagtttggagaatctgccagattctatgttagagaagttgaaacgcatccatgaa
gttttgactaaaacacagaacactcctactggttttagttttgaattcctatcagacagt
ttctcaaggaatgctgatatcatgaaatttatacggaatgctgttttactttgtttaact
gtttttccacgtaattacatgttggaagaagctgttcttatttttgaagagctatatgtt
acaaaaatgaattcttctaacagtatggttacaccgtgtcgatctttagcaaaatctctt
ctgaaaagtgatcgccaggatctattgctatgtggtgtatatgcacgaagagaggctact
tatggtaacattgatcacgcaaggaaagtgtttgacatggcactgttgtctgttgaggcg
cttcctggggaactacagtccaattctcctcttctatatttctggtatgctgaagtggag
gttgcaaataacactgcccatggtagtgaatcttcatgtcgtgcaatacatatattatca
tgcttaggaagtggtacaaaatacattccctttaaaagtcaagcatcaggtgtgcaactc
cttagagcacatcaaggatttaaagaaaaattaagaacagtatggtcatcttgggttcgt
ggcataataaatgaccagtctgtagctctaatatgttctgctgcactgtttgaggagctg
accactggatgggatgcgggtattggagttttgaatcaagctttttcaatggtgcttcca
gaaagaagaagtcaaggttatcatcttgaatttttgtttaactatcatataaagattctt
caaagacataagagagaatcaagtctcatgaaagtttgggaatccatcttgcatggtctc
cagatatatcccttcagtcctgaacttctaaaagatttagtagagatcggccattattac
accacatctaataaactgcggcggattctagatgactgttgttacaagaaaccatctgta
gttctctggctttttgcgttgtcattcgaaatgtttagaggtggttcagaacacagaatc
cgaggattgttcgaaaaggcattgagtaatgacggtcttagcagctcagttgtactgtgg
cgttgctacatcatgtttgaaatggaaattgcaaatgatccttctgcagctcgtcgtgcc
ttcttccgggctatccattcctgcccctggtcaaaaaggctatggttggatggttttctc
aagcttaattctgtccttactgcaaaagagctatctgatctacaggaagttatgcgtgat
aaggaactgaatctaagaactgacatctatgagatccttctgcaagagtcatga
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