Vigna angularis (adzuki bean): 108345760
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Entry
108345760 CDS
T04660
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
var01009
]
108345760
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345760
03041 Spliceosome [BR:
var03041
]
108345760
Protein phosphatases and associated proteins [BR:
var01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108345760
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108345760
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108345760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
RNA_bind
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
108345760
NCBI-ProteinID:
XP_017439987
UniProt:
A0A0L9VPF7
LinkDB
All DBs
Position
8:complement(1403739..1412673)
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AA seq
921 aa
AA seq
DB search
MELKVSSPKPESVAPSDCVSEPEEKEVSEDDDDDRNHKHRRREARSQSLERDVSDPVINR
PFKKRNKTFGNRHPFRVNESQAFETLKTYSDATSDKDIYFKFDRRRPGLTSVPRPPLEMS
QRLRGNPSFPGDPGVGRGRGRESGFWNQRESRFGSMDVASQMVPQGSIPPSLYAGRGIPN
VSNAQNASWNTFGLIPAVPNGGLDMLHPMGLQGTLRPPINSSLNVNISRQRCRDFEERGF
CLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIGAPAGSESLHSVNASTTSMNN
KCLPGKVSKSVVNDDGLTLDGAFTGPAGCTSGADLYDPDQPLWNDSGLEPSNALLTLQSS
KNEETEPILNDAPDGDCPVGAARTSISSQGASSSVWARIGSSKNRFDIKEKTNTAMGSFH
YPENQLKEDNDELVGAHNASFQVKQNIADDADPKALDVSLKAQTDNMRTIRKSSQKALRT
LFVNGIPHKSNKREALLAHFKKFGEVIDIYIPLNSERAFVQFSKREEAEAALKAPDAVMG
NRFIKLWWANRDSIRSDSTNTGNGMIVTPRGQAPAFVPSHPVVTDRGKDIHQADASKTTY
EVSSPTDQSKPVITDGLKVPPPLQKKLVNLENLKEELRKKQEMLDQKRNEFKRQLNKFEK
QASGLKGELSNEQAAKRLKLGTASDVAKLASPPQSSDTEGGMTSPHTEAAADKNKQLVNT
VPQSPKTSTAARLQEPTGLKHPIQPLMPLNRYKLDNRPAAFRIIPPLPAGLTNVEVLKEH
FSPFGELSSVELEDVQTNDSIQQEAHITFTTRWAAERAFINGKCWNEQNLKFMWLTPSIS
SNATGGRERSQSAPKEPLDSDDYSKEKLGNSVNQEVIESDGENRDSETRNGLEHVEMEPN
EDPQSTTKVSSPKQSPEGSVC
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagtttcgtctcccaaacctgagtctgttgcaccatctgattgtgtcagt
gagccagaggaaaaggaggtgagtgaagacgatgatgatgatcgtaatcataagcatcga
aggagggaagctcgctctcaatctttggagagagatgtttcagatcctgttattaatagg
ccattcaaaaagcgtaacaaaacttttggtaataggcatcccttcagggtaaatgaatca
caagcctttgaaacactgaaaacttacagcgatgccacctcagataaagatatatacttc
aagtttgatagaaggcgccctggcttgacttcagttcctcgaccacctctggaaatgagt
caaagactacgtggaaacccatcttttcctggagatcctggtgttggcaggggaagaggc
agggaatctggtttttggaatcaacgtgaatctaggtttggctcaatggatgttgcttca
caaatggttccacaagggtccattccaccaagcctttatgctggacgtgggatacccaat
gtttcaaatgcacaaaatgcatcgtggaatacatttggcttaattccagctgtgcccaat
ggtggtctagatatgcttcatccaatgggtttacagggaacgctcagaccacctattaat
tcttctttgaatgtgaatatttctcgccaacggtgtagagattttgaggagcgtggattt
tgccttagaggggacatgtgtcctatggaacacggtgttaatcggattgtcattgaagat
gttcagagtctttcacagtttaaccttcctgtttcacttccaagtgcacacttaattgga
gcacctgctggatctgaatctttacattctgtaaatgcttctaccacttcgatgaacaac
aaatgtttacctggaaaagtttctaagtctgtagtcaatgatgatggtttgacattggat
ggggcttttactggtcctgctggttgcacaagtggagctgatctttatgatcctgatcaa
ccactttggaatgatagtggtctggagccttcaaatgccctcctaacccttcagtcatct
aagaatgaggaaactgagcccatattgaatgatgctccagatggtgattgtcctgttgga
gctgccagaacatctatcagttcacagggtgccagttcatctgtatgggccagaattggt
agttcaaaaaacagatttgacataaaagaaaaaactaacactgcaatgggttcctttcat
tatcctgagaatcaattaaaggaagataacgatgaattagttggtgctcacaatgcttct
tttcaagtaaagcaaaatatagcagatgatgcagacccaaaagccttggatgtctctttg
aaagcacaaactgataatatgcgtactatacgaaagtcatcacaaaaggcattgcgtact
ctatttgtaaatggaatacctcataaaagtaacaagagagaggcacttctagctcatttt
aagaagtttggggaagttattgacatttatattccattgaacagtgaacgagcttttgtg
caattctctaagagggaagaggctgaagcagctttgaaggcaccggatgctgtaatgggt
aatcgttttatcaagctatggtgggctaatcgtgatagtattcgcagtgatagtaccaac
actgggaatggcatgattgtaactccccgtgggcaggcacctgcttttgttccatctcat
cctgttgtcactgataggggaaaagacatccatcaagctgatgcttcaaagactacatat
gaagtatcatcacccactgatcaatctaagcctgtcatcactgatggactcaaggttccg
cctcctttgcagaagaagcttgtaaacttggagaatctaaaggaagaactgcgcaagaag
caggaaatgctagatcagaagcgcaatgaattcaagcgccagttgaacaaatttgagaaa
caagcttctggactcaagggtgaattgtctaatgagcaagctgccaagagactcaaatta
ggcacagcgtctgatgttgccaaactggcttctcctcctcaatcatcggatactgaaggt
ggtatgacatccccacacacagaggcagcagctgataagaataaacagctggtcaatact
gtaccccaaagtcctaaaacaagtacagcagcaagactgcaagaacctacaggcttgaag
cacccaattcaaccattaatgcctctaaatagatacaaattggacaatcgtcctgctgca
tttcgtatcatcccacctttgccagctggtctaactaatgttgaagttttgaaggagcac
ttctcaccttttggcgaactttcctccgtagagctagaagacgtgcaaacaaatgatagt
atccaacaagaggctcatataactttcactactcgttgggcagctgagagggcatttatt
aatggtaaatgttggaatgaacagaatctgaaattcatgtggttgacaccatctatttct
agtaatgcgaccggtggtagagaacgatctcaatctgctcccaaggagcccttagattca
gatgactattctaaagaaaaattaggaaactctgtgaaccaagaagtgattgaatcagat
ggcgagaatagagattctgaaactagaaatggtttggagcatgtggaaatggaaccaaat
gaagatccccagtctaccacaaaagtttcttctcccaaacagtcacccgaggggagtgtc
tgttaa
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