Vigna angularis (adzuki bean): 108345798
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Entry
108345798 CDS
T04660
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108345798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345798
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108345798
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108345798
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
108345798
NCBI-ProteinID:
XP_017440048
LinkDB
All DBs
Position
8:33639279..33645717
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AA seq
749 aa
AA seq
DB search
MGIPGLSDQNNGQQRLGITEPISLAGPSEDDLIKTRELEKYLQGVGLYESQEEAVGREEV
LGRLDQIVKIWVKNISRGKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
TRDEDFFGELRKMLSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLD
ISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGF
LGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPR
RNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFQRGSEICEAMEASKADWNALFE
PYPFFESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFS
DKSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKR
RNIPAYIFPGGVRPSGPSKVTAENKQSSKLRASGHGQAEKSQGGKGVSVGADDVKKRRRS
EDDMDNSSKNSKSPVSLPPPSREVNEDMTPIKWDESEVNSSDGQKSKKLCLTSPGEIPPG
DSGTNGSVASNQPVNPILAATDISSSKEEEKLAIEKIMSGPYDAHQAFPEEPEELEDDTQ
YRTQVKDTAGSLENITESLALKPAVAEEPVVYMETTCSNSLCSNEGLEELESAELTAPLL
TVPPAPAPLKKPLIRLNFTSLVKAADKSS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctggcttgagcgatcagaataatgggcaacaaagattaggcataactgag
cctatttcattggctggaccaagtgaggatgatttgatcaagacgcgtgaacttgagaag
tacttgcaaggtgttggattgtacgagagtcaggaagaggctgtgggtagggaagaagtt
cttggcaggctggaccagattgtgaagatttgggtcaagaacatcagccgaggaaagggg
tttaatgaacaactggttcaagaagcaaatgccaagattttcaccttcggctcttatcgg
ttaggggtgcatggccctggagctgacatagatactctttgtgtgggacctagacatgca
accagagatgaagacttctttggtgagctgaggaaaatgctatctgagatgcaagaagta
acagaattgcaccctgtgcccgatgctcacgtccctgtgatgaaattcaagtttaatggt
gtttcagttgatctcttgtatgcaagattagctttgtgggttattcctgaagacttagat
atatcacaggagtcaatattacaaaatgttgatgaacaaactgttcttagtcttaatggt
tgtagagtaactgatcaggtcctgcgattggttccaaatattcagacctttcgcacaaca
ttgagatgcatgaggttttgggcaaagcgtcgtggtgtttattcaaatgttgctggtttt
cttggtggtataaatctggcattgcttgttgctcgaatatgccagttgtatcctaatgca
ctacctaatatgttagtgtctcggttctttcgggtgtatactcaatggcgatggccaaat
ccagtcatgctctgtgctattgaagaaggatctcttggactacctgtttgggatcctaga
agaaatcccaaggatagatatcatttaatgcctataattactcctgcttatccttgcatg
aattctacttacaatgtgacatcaagtacattacgtgttatgtcagatgagtttcagagg
gggagtgaaatatgtgaggctatggaggctagcaaggctgattggaatgctctttttgag
ccttatcccttttttgaatcttacaagaactatctacagatagacataactgcagagaat
gcagatgaccttagacaatggaaaggctgggttgagtctcgtctccgccaattaacattg
aagattgaaaggcacacttatggcatgcttcaatgtcatccacatcctggtgaattctct
gacaagtctagaccttttcatcactgttacttcatgggtctgcagcgtaagcaaggagtt
ccagtgaatgaaggtgaacagtttgatataaggctaactgttgaagaattcaagcattct
gtcaatgcttacacactatggaaacctggaatggatattcatgtgtcccatgtgaaacgc
cggaacatacctgcctacatattccctggtggtgtccggccttcaggcccatcaaaagta
actgctgaaaataaacaaagttctaaattaagggcttctggtcacggtcaagccgaaaaa
tctcaaggaggtaaaggagtttctgttggagcggatgatgtgaaaaagagaaggagatca
gaggacgacatggataatagttcaaagaattccaagtcccctgtatctttacctccccct
agcagggaagttaatgaagatatgactcctattaaatgggatgaatcagaagtcaatagt
agtgacggtcaaaagagcaagaaactttgtctgacatctccaggggagattcctcctggg
gatagtgggaccaatggatctgtggcaagcaaccaaccagtgaaccctatacttgctgct
actgatatatccagttctaaagaagaagaaaaactagccattgaaaagattatgtcaggg
ccatatgatgcacatcaagcctttccagaagaacctgaagagcttgaagatgacactcag
tatagaactcaagtcaaagatactgctgggagcttggaaaacattactgaatctttagcc
ttaaagcctgcagtggcagaagagccagttgtttatatggaaactacttgctctaatagt
ttatgctccaatgagggcttggaggagcttgagtctgctgagctaacagcaccattgtta
actgtgcctcctgcacctgcaccgctgaagaagcctcttatcaggttgaacttcacctcc
ttggtaaaagctgctgacaagagttcttag
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