Vigna angularis (adzuki bean): 108345810
Help
Entry
108345810 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108345810 isoform X2
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108345810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345810
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108345810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
Coatomer_E
TPR_8
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
108345810
NCBI-ProteinID:
XP_017440085
UniProt:
A0A0L9TRF8
LinkDB
All DBs
Position
1:10815213..10821952
Genome browser
AA seq
859 aa
AA seq
DB search
MESRDLPSSSPSSTANRDASSGTETEDGVFTVAVALAKDAALHFQSAKFAECVEVLNQLL
QKKQDDPKVLHNIAIAEFFRDGCSDPKRLLEVINGVKRKNDELALALGEQGESVNNVGNK
VVLGSKGSNASAHQFSGSNSTGTMYSDEFDSSVAMLNIAIIWFHLHDYAKTLSVLEPLFQ
NIEPIDETTALHICLLLLDASLACHDASKSADVLTYLEKAFGVSSVSQGDSGNTAQQQAA
NLVTKSAPVAISASATDASSSELGSSANASENHLSRALSEDTLDYEAMILDMGGQNLVRP
MGPSSNDISRALVDRFSTVDLKLKLQLYKVRFLLLTRNLKLAKREVKLAMNIARGRDSSM
ALLLKSQLEYARGNHRKAVKLLMASNNRTDTAFSSIFNNNLGCIYYQLGKYQTSSLFFSK
ALTNCSSLRKDQSLKLPTFSQDNSLLIIYNCGVQYLACGKPILAARCFQKASLVFYKQPL
LWLRLSECCLMALEKGLIKSSRFPSDKLGVGVCVVGIGKWRQLVVENQIPGKGHMDSSEG
DDSCPSEDGRLKLSMSLAQQCLLNALNLLDSNNANCLKSGLPSNSSVEENDGSEVSPSKN
SNLKNLHGIDSKAFSVGVGLGQVNANGDTKEQKGGNSQELVQNSLSYYENVRKRENQLVK
QAVLANLAYVELELDNPLKALSVARSLLELPECSRIYIFLGHVYAAEALCLLNRPKEAAE
HLSFYLSGGNNVDLPFSLEDCEKWQPERTAEFEEVNVGSVAAKNSSLEGAQSIVFLKPEE
ARATIYANFAVMSAMQGEFEKSSILITQALSILPNSPEATLTAVYLDILLGKPQEALTKL
KRCSRIRFLPSGITLNKSS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaatcccgagatttaccgtcgtcgtccccgtcgtccaccgccaaccgcgacgcctcc
tccggcaccgagaccgaggacggcgttttcaccgtcgccgtggcactcgccaaagatgcc
gcgttgcattttcagtctgccaagttcgccgagtgcgtcgaggttttgaaccagctcctg
cagaagaagcaggacgatcccaaggtacttcataatattgcaattgcggaattcttccga
gacggttgttcagatcccaaaaggttgcttgaagttataaatggcgtcaagaggaaaaat
gatgagcttgctctagctttgggagaacaaggagagtcagttaacaatgttggaaataaa
gttgttttgggatccaaaggaagtaatgcttcagcgcatcagttttcaggttcaaacagc
actggcaccatgtattcagatgaatttgactcttctgtggcaatgctaaatattgccatc
atttggttccatctccatgactatgcgaagacattgtctgtgttggaaccgctctttcaa
aatattgaacctatagatgagacaacggctcttcatatttgtcttctgctgcttgatgct
agccttgcttgccatgatgcatcaaaatcagctgatgtgttgacttatctggaaaaagca
tttggtgttagtagtgtgagtcaaggtgacagtgggaacacagcacagcaacaagctgca
aatttagttaccaagtctgcacctgttgccattagtgcgtcagctactgatgcatccagt
tctgagttagggtcaagtgcaaatgcatctgaaaatcatctatccagagctttgtctgag
gatacacttgattatgaagccatgattttggatatgggtggacaaaatttagtaaggcca
atgggcccatcttcaaatgacatttcaagggctttggttgacaggttttctactgttgat
ttaaagctaaaattgcaactttacaaggttaggtttctgcttcttactaggaacttgaaa
ctggcaaaacgagaagtcaagctggccatgaacattgcacgtggaagagattcatcaatg
gctcttcttttgaaatcccagcttgaatatgcccgtggtaaccaccgcaaagctgtaaag
ctattgatggcatcaaataatagaacagacacagcattttcaagcattttcaacaacaat
cttggttgcatttattatcagcttgggaaatatcagacgtcatctttatttttctcaaag
gcattaaccaattgctcatcactgcggaaggatcaatctttaaagctacccactttctca
caggacaattctctccttataatttataattgtggtgtgcagtacttagcttgtgggaag
ccaatacttgctgctcgatgtttccagaaggcaagtctggtcttttataaacaacctctc
ttgtggctcagactctcagaatgctgtttgatggctttagaaaagggcctcatcaaatca
agtcggttcccatcagataagttgggggtaggagtgtgtgttgttggaattggaaaatgg
aggcaacttgtggtggaaaatcagattccaggaaagggacatatggactcatctgaaggg
gatgattcttgtccaagtgaagatgggcgactgaagttatcgatgtcccttgcccagcaa
tgcctcttgaatgctctaaacttgctggattccaacaatgcaaattgtttgaaatctggt
ttgccctctaactcttccgtggaggaaaatgatggaagtgaggtgtcaccttcaaagaat
tcaaatcttaaaaacttacatggcattgattcaaaggcattttcagtaggagtaggttta
ggtcaggtcaatgcaaacggagacactaaggaacaaaagggtgggaatagtcaggaactt
gttcagaactccttatcctattatgaaaatgtccgtaaaagagaaaatcaactggttaaa
caagctgttcttgctaatttagcttatgtggagctggaattggacaatcctttgaaggca
ctatcggttgcaagatctctcttagaacttccagaatgttccagaatttacatctttcta
ggccatgtttatgcagcagaggctctctgcttgctgaacagaccaaaggaagcggctgag
catttgtcattttatttgtctgggggaaacaatgttgacttgcctttcagccttgaggac
tgtgagaaatggcaaccagagaggactgccgaatttgaagaggtgaatgtaggatccgtt
gctgccaagaattcttctcttgaaggcgctcagagtattgttttcctcaagccagaggag
gcgcgagcaacaatttatgcaaattttgctgtaatgtccgcaatgcagggtgagtttgag
aaatcaagtattttgatcacacaggcattgtccatattacccaacagtccagaagccaca
cttactgcagtttatttggatattttgctcggtaagccacaggaagctctgaccaaatta
aaacgttgtagccgtattaggttccttcctagtggaataacattgaataaatcttcttga
DBGET
integrated database retrieval system
