Vigna angularis (adzuki bean): 108345964
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Entry
108345964 CDS
T04660
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
var03000
]
108345964
03036 Chromosome and associated proteins [BR:
var03036
]
108345964
Transcription factors [BR:
var03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
108345964
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
108345964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
108345964
NCBI-ProteinID:
XP_017440329
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All DBs
Position
8:4489345..4495357
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AA seq
640 aa
AA seq
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MSDGHLFNNITLGGRGGTNSGQIRIYAGGIIWKRQGGGKLIEVDKSDIMGVTWMKVPRTN
QLGVQIKDGLYYKFTGFRDQDVVSLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA
FMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYSVELHMSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVQSELAIT
EDLYNTKYKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ
RNEYHNLYEFISSKGLKIMNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGGDESDE
EDSDFVADKDDEGSPTDDSGADDSDGSDSGDEKEKPVKKESKKDLPSKATTSKKKSKDDE
DGKKKKQKKKKDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVGRVLGEKWKKMSAD
EKEPYEAKAREDKKRYKDEISGYKNPQPMNIDSGNDSDSS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggccatctcttcaacaacatcaccctcggaggccgcggaggcacgaattct
gggcagataaggatttatgctggaggaattatatggaagagacagggcggcggtaaatta
attgaagttgataaatctgacataatgggggtgacatggatgaaggttccaaggactaac
caacttggggttcaaatcaaagatgggttgtactacaagttcacaggatttcgcgaccag
gatgttgtaagtttgaccaatttttttcaaaacacctgtggaatatcagtagaggagaaa
caactttctgttagcggacgtaattggggagaagttgatctaaatggaaatatgctggct
tttatggttggttcaaagcaagcttttgaagtttctttagcagacgtctctcaaacacag
cttcaagggaagaatgacgtgatcttggagtttcacgtggatgacacaactggagctaat
gagaaagattcattgatggagataagtttccatataccgaattccaacacccagtttgtt
ggtgatgaaaatcgtcctcctgctcaggttttccgtgacaaaataatgtctatggctgat
gttggtgctggaggtgaagatgctgttgttacctttgagggtattgcaatccttacacca
aggggacgatacagtgttgagttacacatgtcattcttgcggcttcagggacaagctaat
gatttcaaaattcagtatagcagtgtggttcgcctatttttgcttcctaagtctaatcaa
ccacataccttcgttatcattagccttgacccccctattcggaagggacaaactttgtac
cctcatattgtgatgcagtttgaaactgattatgttgttcaaagtgaattggcaataact
gaagatctttataacacaaagtataaggataaattggagctgtcttataagggacttatt
catgaagtgttcaccacaatattacgtgggttgtcaggtgccaaagtgactaagcctgga
aaatttaggagttgtcaagatggttatgcagtgaaatcatctttgaaagctgaagatgga
attctgtaccctcttgagaagagcttcttctttctgcctaaacctcccactctaattctt
catgaagagattgactatgtggagtttgagaggcatgctgctggtggctccaatatgcat
tatttcgaccttcttatcagactgaaatctgaacaagagcatctattccgtaatattcag
agaaatgagtaccacaatctgtacgaatttatcagttcaaagggcttgaaaattatgaat
ttgggagatgcccaacccacggttggtattaagaaggttcttgagaatgatgatgatgat
gctgttgatccacatcttgagcgtattaaaaatgaagctggtggagatgaaagtgacgag
gaggattccgattttgttgctgacaaggatgatgaaggttctcctactgatgattctggg
gcagatgattccgatggtagtgatagtggtgatgagaaagagaagcctgtcaaaaaggaa
tcaaagaaggacctgccttctaaggcgactacttcaaaaaagaaatctaaagatgatgag
gatggaaagaagaaaaaacagaagaagaaaaaggacccaaatgcacccaagagggcaatg
tccggtttcatgttcttttctaaattggaaagagagaatctaaagaaaactaatcctgga
atttcatttacggacgtgggaagagtacttggagagaaatggaaaaagatgtcagcggat
gagaaggaaccatacgaggcaaaagcacgcgaagataaaaaacgttacaaggatgagatc
agtggctacaagaatccccaacctatgaatattgattctggaaatgactctgacagttct
taa
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