Vigna angularis (adzuki bean): 108345978
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Entry
108345978 CDS
T04660
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108345978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108345978
Spliceosome [BR:
var03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108345978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6139
Motif
Other DBs
NCBI-GeneID:
108345978
NCBI-ProteinID:
XP_017440349
UniProt:
A0A8T0JWG3
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Position
8:30814909..30820580
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEAEIPEDNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQK
TQRYIDVIQKVEEALKMGSDVSTQGVDLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP
LPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
TSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAK
STLAARVDSIRGDPSGNTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKRFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
RIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcttgctgattcttttcttgccgacctcgatgaactctctgataacgaggca
gaaattccggaggataacgatgttgatgctgctgacatggaagaggatgttgatggtgat
ctagctgacctagaaaacctcaactatgatgacttggacagtgtttccaagttgcagaaa
acacagaggtacattgatgttatacagaaagtggaagaggcccttaaaatggggtcagat
gtctcgactcagggagtggatctagaagatgatcctgaatatcaattgattgtggattgc
aatgctctgtcagttgacattgagaatgaaattgttataatccataattttattcgtgac
aaatatcgattgaaatttcctgaacttgagtcgttggtgcatcaccccattgattatgca
cgtgttgttaaaaagataggaaatgaaatggatttaactcttgttgatttagaagggctt
ttaccctcagccattataatggttgtgtctgttactgcttcaactacaactggcaagcct
ctcccggaagaagtccttagtaagactgttgaggcctgtgatcgagcacttgatcttgat
tcagcaaagaagaaggttctagattttgttgagagtagaatgggctacattgcgcccaat
ctctctgctattgttggaagtgctgttgcagctaaactcatgggtacagctggtggtctg
acgtctctagcaaagatgcctgcttgtaatgttcagctactaggtgccaagaaaaagaat
cttgctgggttctccactgcaacatctcaatttcgtgtaggttacctcgagcaaacagag
atatttcagactactcctccatctctaaggatgcgagcatgtcgactcttggctgcaaag
tctacacttgcagcacgtgtagattccatacggggggatccatctggaaatactggaagg
gctttcaaggatgagattcacaaaaaaattgagaagtggcaggagcccccacctgcaaag
caaccaaaaccacttccagttcctgattctgagcctaaaaaaaagagaggtggtcggcgg
cttaggaagatgaaggaaaggtatgcaataacagacatgaggaaattagccaataggatg
caatttggagtcccagaagagagttcattaggagatggtctgggtgagggctatggaatg
cttggtcaggctggcagtggcaaactgcgtgtgtctattggtcaaagcaaacttgctgca
aaagttgcaaaaagattcaaggaaaagaattacggtagcagtggtgctacatctggtttg
acatcaagtcttgcattcacaccagtgcaggggattgagctgacaaatccacaagctcat
gctcatcaacttggtagcggaactcaaagcacctacttctctgaaacaggaacattttcg
aggattaagaggacatga
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