Vigna angularis (adzuki bean): 108346240
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Entry
108346240 CDS
T04660
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108346240
09122 Translation
03013 Nucleocytoplasmic transport
108346240
03015 mRNA surveillance pathway
108346240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108346240
03041 Spliceosome [BR:
var03041
]
108346240
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108346240
Spliceosome [BR:
var03041
]
Complex C
Other components
EJC/TREX
108346240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
108346240
NCBI-ProteinID:
XP_017440749
LinkDB
All DBs
Position
9:complement(30554472..30557714)
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AA seq
151 aa
AA seq
DB search
MGSEEENNEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPA
VLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSAD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgaagaggagaacaacgaattctatctccgctactacgtcggtcacaaaggg
aagttcggtcacgagttcttggagttcgagtttcgccccgacgggaagcttcgctacgct
aataactccaactacaaaaacgacaccatcatccgcaaggaggtttacctcactcccgcc
gttctccgcgagtgccgtcgcatcatctccgaaagcgagattatgaaggaagatgataac
aactggccagaaccggaccgggtggggcgacaggagctggaaattgttatggggaatgag
cacatatcgttcacgacctcgaaaattggatctttggtggatgttcagagcagtgctgac
ccggaaggacttcgtatcttttactaccttgttcaggatttgaagtgctttgtcttttct
ctcatttcacttcacttcaagatcaaacctatctaa
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