Vigna angularis (adzuki bean): 108346640
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Entry
108346640 CDS
T04660
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108346640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108346640
Enzymes [BR:
var01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
108346640
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
108346640
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
108346640
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108346640
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108346640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
Macro
zf-C2HE
HIT
AAA_18
Zeta_toxin
AAA_16
KTI12
AAA
POT1
Motif
Other DBs
NCBI-GeneID:
108346640
NCBI-ProteinID:
XP_052724810
LinkDB
All DBs
Position
9:20895691..20900427
Genome browser
AA seq
764 aa
AA seq
DB search
MDMMDVDETSAPREGKPVLVILVGAPGSGKSTFGEDVMRSSTRHWVRVCQDTIGNGKAGT
KAQCLSSATSALKDGKSVFIDRCNLDREQRSEFIKLGGGLQIDVHAVVLDLPAKLCISRS
VNRTGHEGNLQGGRAAAVVNRMLQHKELPKLSEGFNRITFCQNENDVKNAINLYSSLGPL
DNLPHGCFGQKNTDSKIQVGIMKFLKRAEVPLAAASTTSGTEEPTSQTPRNNSYCKDKEA
LSSISDTDNLETKEVERQEVGSAGSHANPVCPDDIPTLAFPSISTSDFQFNLEKAADIIV
EKVAEFLNKFRNARLVLVDLSHKSKILSLVKARIAEKNMDTQKFFTHVGDITHLYSRGGL
RCNAIANAANWRLKPGGGGVNAAIFNAAGPELESATKDKVKSLSPGNAAVVPLPSSSPLF
TREGVTHVIHVLGPNMNPQRPNYLNNDYNKGCKILQDAYTSLFDGFASIVRNHPGIPEGK
GEKLERKSLELPVQSDCSSRKYFTGTDQKSKRSDDHGSEKSKKCKGTQDDLGLPFTDSKG
EKVDSEHRRIERSRSKAWGSWAQALHQIAMHPEKHKGDLLEISDDVVVLNDIYPKAQKHV
LVLARTGGLDCLADVQKEHLQLLNMMHDVGLKWAEKFLSENASLVFRLGYHSAPSMRQLH
LHVISQDFESTQLKNKKHWNSFNTAFFRDSVDVMDEVSSDGKATLKDDDKLLSMELRCHR
CRSAHPNIPRLKSHIRSCQSPFPAYLLQNGRLVHAPGEPRNSVQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatggacgtggatgaaacttctgcacccagagagggcaagcccgttttggtg
atcctggtaggagcacccgggagtggtaaatccaccttcggcgaagatgtaatgcgttca
tctactcgccactgggttcgcgtttgccaggacactattggaaatggcaaagcaggaact
aaagctcagtgcctaagcagtgcaactagtgcattgaaggatggaaagagtgtatttatt
gacaggtgcaatcttgacagagaacagcggtcagaattcataaagcttggtggtggactc
caaatagatgtccatgcagttgtacttgatcttcctgcgaagctttgtatttctcgatca
gtcaatcgaactgggcatgaaggaaatttgcagggtggaagagcagctgcagttgtgaat
agaatgcttcaacataaagagcttcccaaattaagtgaaggctttaaccggataacattt
tgtcagaatgagaatgatgtaaaaaatgcgattaatttatacagctcacttgggccactg
gataatcttccgcatggctgctttggccagaagaatacagattcgaaaattcaagttggc
ataatgaagttcctaaaaagagcagaggtcccacttgctgctgcatctacaacgagtggc
actgaagagcctacttcccagactccgagaaataattcgtactgcaaagataaggaagca
ctttcctcaatttcagatactgacaacttagagacaaaggaagtagaaaggcaagaagtt
ggttctgctggttcgcatgccaatccagtttgtccggatgatattccaactctggcattt
ccctctatttcaacatctgatttccaattcaatcttgagaaggcagctgatattatcgtt
gagaaggttgcagagttcttaaataagtttaggaatgccagacttgttcttgttgactta
tctcataagtcaaagattttgtccttagttaaagccagaattgcagaaaaaaacatggac
acccaaaagttttttacccatgttggggacattactcatctttattccaggggaggtttg
cgatgcaatgccattgctaatgctgccaactggaggttgaaacctggaggtggaggtgtt
aatgcagcaatttttaatgctgcaggtccagaactggagtctgcaacaaaagataaagta
aaatctctttcacctgggaatgctgctgttgtccctctgccttcatcttctcctttgttc
accagagagggtgtaacccatgtaatacatgttcttggacctaatatgaacccacaaaga
ccaaattatctaaataatgattataataaaggctgcaaaattctgcaagatgcttatact
tcactctttgatggttttgcgtctattgtgcggaaccacccagggataccagagggaaaa
ggtgaaaagcttgaaaggaaatcattggagttgccggttcagtctgattgttcttccaga
aaatattttacaggtactgatcaaaagagtaagagaagtgatgatcatggatcagagaaa
agcaagaaatgcaagggaactcaggatgacttaggattgccctttactgattctaagggt
gaaaaggtagattcagagcatagaagaatagagaggagcaggagtaaggcttggggatca
tgggctcaagctcttcaccaaatagctatgcatcctgaaaagcataagggtgatttgctt
gaaatttccgatgatgttgttgtattgaatgatatctatccaaaggcgcagaagcatgtt
ctggtgttggcacgaactgggggtcttgactgcctcgctgatgtccaaaaggagcacctt
cagttattgaacatgatgcacgatgtgggtttaaagtgggctgagaagttcttaagcgag
aatgcttctctggtatttcgacttgggtatcactcggcaccatcgatgcgacaactacat
ttacatgttattagccaggactttgaatcaacacaattaaagaataagaagcactggaac
tcatttaacactgctttctttcgtgactcggttgatgtaatggatgaggtctctagtgat
gggaaggcaacgttgaaagatgatgacaagctactctctatggagttgaggtgccacaga
tgtagaagtgcacatccaaacataccccggttaaaatctcatataagaagctgccaatcc
ccatttcctgcatacctacttcagaatggacgtttagtgcatgctccgggggaacctcgc
aacagtgtacagtag
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