Vigna angularis (adzuki bean): 108347040
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Entry
108347040 CDS
T04660
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108347040
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108347040
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
UPF0242
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
108347040
NCBI-ProteinID:
XP_017441638
UniProt:
A0A8T0LFD8
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Position
1:60864952..60901463
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AA seq
1052 aa
AA seq
DB search
MSESRAPKRPKITRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSL
VCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRADHRNENISVMRKISTNNKSE
WLLNGSVVSKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL
PEQHRTLVDKSRSLKHIELSLERNEGTLKQLKERNAELETDVERVRQRDELLAKAESMKK
KLPWLKYDMKQAEYREVKERENDAAKALEEAAKLLNDLKEPIMKQKEEKASLDAKCKRVS
RIVNENAKKRIELMEEEHKLDVELQGKYKEMEELRRQEETRQQKLVKAREELAIAEHELE
NLPSYVPPKDELQRLKAEIGELDYAANQVRQNKSQAENEIKRKKSFMMQNKERLMEMDNK
STKCLHVLQRSGAEKIFEAYKWVQEHQHEFNKEVYGPVLVEVNVSNKVHAAYLEGQVAHY
TWKSFITQDSGDRDLLVKHLQFFDVPVLNYTGDGGHQREPFEISEDKRALGIYSRLDQIF
EAPIAVKEVLISQFNLDHSYIGSKETDQNADEVPRLGIVNLWTPENHYRWSKSRYVNHVS
TVVEQVERPQLLLNNLNVGEIEKLRSQQKELEEVVANLEECVKKFQDEERSLVNQAANFR
KEWEGISITVQNERKKRQTLISRIDQRKGLLKVMEERDDLDTEIAKLVHQASRYNIQRFR
NAMEIKDLLVEAVSYRRTFIEQRMAFIEFDAKTGEMDANLKQHENFAVQASLHFENCKKE
SENCRQKLTDSLKYAKSIAQLTPELKKEFLEMPTTIEELEAAIQDTTAQANSILFVNHNI
LEQYKDRQRQIEDLAAKLEADRKESTRCLAELNDIKGKWLPTLRNLVAKINETFSFNFQE
MAVAGEVSLDEHDIDFDQFGILIKVKFRETGQLKVLSAHHQSGGERSVSTIVYLVSLQDL
TNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILN
VMNGPWIEEPSKVWTTGDRWSIITGLVGNTLC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatctcgggcccctaagcgccccaaaataactaggggggacgatgattatatg
ccgggaaatattcttgagatcgagctttgtaatttcatgacgtttgactatttaaaatgc
aaacctgggcctcgactgaatcttgtaattggacccaatggctctggtaagagttcgctt
gtatgtgctattgctcttggcctgtgtggagagccccagttgcttgggcgtgctacaagt
attggggcatatgtgaagcgtggagaagaatctggctacattaagatcaccttgagagcg
gaccatagaaatgaaaacattagcgttatgcggaaaattagtactaataacaagtctgaa
tggttgctcaatggaagtgtggtgtctaaaaaggatgtggctgaaaccattcaaaggttt
aacatacaagtcaataatttgacccagttcttaccacaagacagggtctgtgagtttgcc
aagttaactcctgttcaacttctggaagagaccgaaaaggctgttggtgatccacaactc
ccagagcaacatcgaacactagttgataaaagccgttcattgaaacatattgagttgtct
ctggagagaaatgaaggaaccttaaaacagttgaaggaacgaaatgctgaattagagaca
gatgttgagcgtgttcgtcaaagagatgaacttcttgccaaggctgaatcaatgaaaaag
aagttgccatggctgaagtatgatatgaagcaggcagaataccgggaagttaaggagcgt
gagaatgatgcagcaaaggcattggaggaagctgcaaagttattaaatgatcttaaagaa
cctatcatgaaacaaaaagaagagaaagcttcattagatgcaaaatgcaaaagggttagt
cgcattgtaaatgagaatgcaaagaagagaattgagcttatggaggaggagcacaaattg
gatgtggaattacaaggaaaatacaaagaaatggaagaattgaggagacaagaagaaaca
cgacaacaaaaacttgtaaaagcaagggaggaacttgctatagctgaacatgaacttgag
aacttaccctcttatgtacctcccaaggatgagcttcaaagactaaaagccgaaatcggt
gaattggattatgctgctaatcaagtgaggcagaataagtcacaagcagagaatgaaata
aagcgcaagaagtcattcatgatgcagaacaaagagaggttgatggaaatggataataaa
agtacgaagtgtttgcatgtattgcaaaggtcaggggctgaaaaaatttttgaagcttat
aaatgggtccaagaacatcaacatgaattcaataaggaggtttatggcccagtcttagta
gaggtgaatgtatcaaataaagttcatgccgcatatctagagggtcaagtggctcactac
acttggaagtccttcataacacaagattctggtgatcgagatcttttggtgaagcacctg
cagttctttgatgtaccagttttaaattatacaggtgatggtggccaccaaagagagcct
tttgaaatttccgaagataaacgtgctcttggcatatactctcggctggatcaaattttt
gaggctcctattgccgtaaaggaggttttgattagccagtttaatctagatcattcatat
atcggatccaaagaaactgatcagaacgctgatgaggtgccaagattaggaattgtaaat
ttgtggacacctgaaaatcactaccgttggtccaagtctagatatgtaaatcatgtctct
acagtcgttgaacaagtggaacgcccacaacttttattgaataatttgaatgttggtgaa
attgaaaagctgcgttctcagcaaaaggagcttgaagaagtcgttgctaatttggaggaa
tgtgttaaaaagtttcaagatgaagaaagaagcttagtgaatcaagctgctaattttcgt
aaggagtgggaaggcattagtattacagtacagaatgagcgtaaaaaacgtcaaacactc
attagccgtattgatcagaggaaagggttattaaaagtgatggaggaacgggatgattta
gatactgagatagcaaagcttgttcatcaggcttccaggtataatattcagcgttttcgg
aatgcaatggaaattaaggatcttcttgttgaagctgtgagttacagacgaacttttatt
gaacaacgtatggcttttattgagtttgatgcaaagactggagaaatggatgccaacctg
aagcagcatgagaattttgctgtgcaagcatcattgcacttcgaaaactgtaagaaagaa
tctgagaactgtagacagaagcttacagattccttgaagtatgctaaatcaattgctcag
cttacacctgagctaaagaaggaatttcttgagatgcctactacaattgaggaactagag
gcagctatccaggataccactgctcaagccaattcaattctcttcgtcaatcataacata
ttggaacaatataaagatcgtcaacggcagatagaagatcttgcagcaaaactggaagca
gacagaaaggaatctacacggtgtttggctgagttaaatgacattaagggaaaatggctt
cctacattgagaaacctagtagcaaaaataaatgaaaccttcagtttcaatttccaagag
atggccgttgctggagaagtttcgctagatgagcatgatatagattttgatcaatttgga
atactgataaaagttaaattcagagaaactggacagcttaaagttttgagtgcccatcat
caatctggaggggagcgatcagtttcaactattgtttatcttgtttcccttcaagatctg
acaaactgcccatttagagttgttgatgagatcaaccaagggatggacccaataaatgaa
aggaagatgttccagcaattagtgagagcagcaagcaagccaaataccccccagtgtttc
ttacttaccccaaaattgttaccagatctgcaatatagtgaggcatgtagtatattgaat
gtgatgaatggcccttggattgaagaaccctcgaaggtctggactaccggtgatcggtgg
agtattatcactggactcgttggaaacacactttgctga
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