Vigna angularis (adzuki bean): 108347398
Help
Entry
108347398 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108347398
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108347398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108347398
Membrane trafficking [BR:
var04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108347398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
TPR_VPS8_2
Beta-prop_EML_2
ANAPC4_WD40
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Prp19
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
108347398
NCBI-ProteinID:
XP_017442092
UniProt:
A0A0L9VQ61
LinkDB
All DBs
Position
9:complement(4887647..4903286)
Genome browser
AA seq
1916 aa
AA seq
DB search
MEPDVRSLLNSASSSASSSDADDDAPHRTIDEILNDCDTSSSSSSPPSSPSHSLSPLTNS
HPQNPTLQPKPLQPALDSISRLKPAEFSDRTRVSRPFSSLLQGVRSNAKPGAALAAAAAA
SRSVPTPHAAAIISRRKSAAAISTELSSTAAASDDYSDVSSKGELGELSEKYDPVPQRIE
TQSSESASVNGERVESDADIAIDLKAGSAADNQVHIDTDNDSRDGDDDGNGNYNDSSIVS
EENRNLDEVDGYHGKDMNSSTFDEDNNDRDLDGNDGSEKRITAMDSAVETEETVDNGESS
VDHVKNELSGGGSDDGSSLGDVSELVEERLEELESRRASKRAEKKREFSMKPLELAEKLE
KKRASTGLHLEEGAAAQPMRLEGVRRGSTTLGYFDVDADNAVTRAISSQTFRREQGSARA
VAVHANYIAVGMSKGLIVVFPSKYSIHHADSSDGKMLMLAMQGDRLRAPVTSMSFNQQGD
LLLAGYGDGHLILWDVQKGVVAKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDCKGLV
LLHIISVVPLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPFSQGNTSTPASSI
SSMMGVVGGDAGWKLFNESSSLLEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREG
SMPYTAWKYMTQTHSSTENMSAEASERVSLLAIAWERKVLVAKLVKSELKVYGNWSLEGA
AIGLAWLDDQMLEVQTSSGQLYLFSKDGTVIHQTSIAIDGIGGDDLVSYHTHFINVFGNP
EKAYHNSVAVRGASIYVLGPTHLLISRLLPWKERISVLRKAGDWMGALNMAMTLYDGHAH
GVIDLPRTLDAVHEAIMPFLVELLTSYVDEVFSYISVAFCNQIGKVDPSNNSNSRSNSVH
CEIKEQYNRVGGVAVEFCCHIKRMDILFDEIFSKFVGVQQRETFLELLEPYILKDMLGSL
PPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLD
DFRAPLEELFAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGTIPPTRLPSLRREL
VEFLLKDSCTSKSHTISDSESRGPHPNLYLLLKLDTEATLDVLRCAFIEDEIPNACSSSP
DAANKPIEEAKKEDKATETQNALVQNTVDALIQIIDTNIVQTDTTFSSGEDGLIKEWSSK
DIGYLFEFIAYYVATQRAKISKGVLCQILEYLTSDSHSSTDISVYCSTPKNREKQVLALL
EVLPKSDWDPSFVLDLCERAKYHQVCGLIHSFRHEYVAALDSYMNDVDEPIHTFSFINKT
LSQLTDNEHVAFRSAVILRIPELVELSREGAFHVVISHFSEESSHIITELHSHPRSLFLY
LKTLIEFHLFGTLDLSNLSKDDTMNPLNGRQVKDHSEGVRDYLENISNFPKFMREKPIHV
PDDLIELYLELLCQYEGSSVLKFLEMFDSYRVEHCLRLCQEYGIIDATAFLLERVGDVGK
ALSITLSDLNDKFVKLDAAVEAVVLNRSRVGSSHVEVLDTVLRTKEGSDIQDLLRACIGL
CQRNTPRLNPEESEAHWFKLLDSFCDPLIDSNVKGAYESKNHFGMLAGSADSQQDKDAYK
SSWKISKSRNGHILRKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKLTILG
MLGTYGFERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSLVCCICNCLLTKNSGSSG
IRIFNCGHAIHVQCEVSEIEASSRGSSSGCPLCMPGKKSQQSRNKSIIATNGLVNKFSSR
RQYPHGSTIHSHDSDLTENMYGQQQISRFEILSNLQKNQRFMQIENLPQLKLAPPAVYHE
KVNKVANFLTGESSNNSSAIEKQSRNKQNRELRVKGSSIRFPLKSSIFGKEKTNKR
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgacgtccgttcactccttaactctgcctcctcctccgcttcttcctccgac
gccgacgacgatgctccccaccgcaccatcgatgaaattctcaacgactgtgacacttct
tcttcctcaagctctcccccttcctctccctctcactctctctctccactcaccaattcc
catcctcaaaaccccactcttcaaccaaaaccactccaacccgcactcgattcaatttct
cggctcaaaccagccgaattctccgaccgcacacgcgtttcgcgtccgttctcttctcta
ctacagggcgtgcggtccaatgcgaagccgggcgccgccctcgcggctgctgctgcggcg
tctcgatccgttcctacgccgcacgcggcggcgatcatttccaggaggaaatctgcggct
gcgatcagcactgagttgagttcgaccgctgccgctagcgacgattattccgatgtttct
tctaaaggcgaattgggcgagcttagtgagaaatacgatcctgtgccgcagagaatcgag
actcagtctagtgaaagtgcttctgttaacggcgagcgtgttgagagtgatgcagatatt
gccattgatttgaaggctggtagtgccgctgacaatcaggtgcatattgatactgataat
gacagtagggatggcgatgatgatggaaatggcaattataatgattcttctatagtgagt
gaggagaataggaatttagatgaggttgacggttaccatgggaaggatatgaattcttca
acgtttgatgaagataataatgatcgtgacttggatgggaatgatggttctgaaaagaga
atcacagctatggattcagctgtggaaacagaagaaacggtggataatggtgaaagctct
gtggatcatgttaaaaatgagctgagtggtggcggtagtgacgatggtagttcattgggt
gatgtttcagagctagtggaagagaggcttgaggaattggaaagcagaagggcttctaag
agagcagagaagaaacgagaattttcaatgaaaccacttgaattggctgaaaaattggag
aaaaagcgagcttcaactggtttgcatttggaagagggtgctgctgcccagccaatgaga
ctcgagggcgttcgaagagggtccacgacgttgggatactttgatgttgatgctgataat
gcagtcaccagggcgatttcgtcccaaacattcaggcgtgagcaaggttctgcccgagcc
gtggcagttcatgctaattatattgcagtaggaatgtcaaaagggctcattgttgtcttt
cccagtaaatattccattcatcatgctgatagctctgatggaaagatgttgatgcttgct
atgcaaggtgatcggttgcgtgctccagtgacatctatgtctttcaatcaacaaggagac
cttcttttagctggttatggtgatggtcatcttatcctgtgggatgtacagaaaggggtt
gtagcaaaagttattagtggtgagcatacagcaccagtagtacataccttatttctaggt
caagatcctcagaatactcgtcaatttaaagcagttactggtgattgtaagggtctggtt
ctcttgcacattatctcggttgttcctttgtttagtagattctccatcaaaactcagtgt
cttcttgatggacaaagtacaggcttggtgctttcagcttcaccactccttttcgatgac
ttcagcggaagtgcttcgcctttttctcagggaaatacctcaaccccagccagcagtata
agcagcatgatgggtgttgttggcggagatgcaggttggaaactcttcaacgaatcctct
tctttgttggaagaaggtgtggttgtatttgtaactcatcaaactgcattggtggtacgg
ctgagccctacattgcaagtctatgctcaactctctaggccagatggggttcgggagggg
tctatgccgtatactgcatggaaatacatgacacaaacacatagttctactgaaaatatg
tctgcagaagctagtgaaagagtttcattgcttgcaattgcttgggaacgtaaggttctg
gttgcaaagttagtgaaatcagaactaaaagtatatggaaattggtctctcgaaggtgcg
gctataggtctagcgtggttggatgatcagatgctggaagttcaaacttcaagtggacaa
ctgtatttattttccaaggatggaactgtgattcaccaaacaagtattgccatagatggt
attggaggagatgatctagtctcttatcatactcacttcatcaatgtattcggaaatcct
gagaaagcttatcataactctgttgctgtaagaggagcttctatttatgtacttggtcca
acacatcttctcatttctcgtcttctaccttggaaagagcgtatttctgttttgcggaaa
gcaggtgactggatgggtgccttgaacatggcaatgactctttatgatggccatgctcat
ggtgttattgatcttcctagaaccttggatgccgtacatgaggccataatgcccttcttg
gtggagttgcttacatcatatgttgatgaagtgttctcctacatttcagtggcattctgc
aaccaaataggtaaagtggacccatccaataattcaaatagtagaagcaattcagtacat
tgtgagataaaggagcaatacaaccgtgttggtggggttgctgttgaattttgttgtcat
atcaaacggatggacattctttttgatgaaattttctccaagttcgtgggtgttcaacaa
cgagaaacatttttggagcttctggagccatatattttgaaagacatgcttggatctcta
cctcctgagatcatgcaagaattggttgagtattatagtaccaaagggtggttacagcgg
gttgagcaatgtgtacttcatatggatatatcatccttggattttaatcaggtcgtcagg
ttatgccgggagcatggactttatagtgccctggtttatgtcttcaataaaggattagac
gattttagggctcctctggaggagctgtttgctgtcttacaaaatagccaaaaggaaagt
gctactgcacttgggtatagaatgctggtttatctcaagtactgctttacaggtcttccc
tttccaccaggccgtggaactattcctcccacacgcttaccttctcttagaagagaactt
gtggagtttttgttaaaggactcctgtacttcgaaatctcacaccatttcagattctgag
tccagaggaccccacccgaatctttatcttcttttaaagttagacactgaagctacctta
gatgtcctcagatgtgcttttattgaagatgaaattccaaatgcctgctcatcttcacca
gatgcagccaataaacctatagaggaagcaaaaaaagaagataaagctactgaaactcaa
aatgctttggttcagaacacagttgatgcactcattcaaataattgatacgaatattgtt
cagacagatacaacctttagtagtggtgaagatgggttgataaaagagtggtcttcgaag
gacataggttatctatttgagttcattgcatattatgttgctacccaaagagctaaaatt
tcaaagggtgtactgtgtcaaatattggaatatttgacatctgatagtcactcctctacc
gatatttctgtttattgctcaactccaaaaaacagagagaagcaagtgctagcactgttg
gaagtacttcctaagtcagactgggatccttcatttgtgctagatctatgtgaaagagcc
aaatatcatcaggtttgtggattgatccatagtttcagacatgaatatgtggctgcactg
gatagttatatgaatgatgtagacgagcctattcataccttttcctttattaataaaaca
ttatcacagttgactgacaatgagcatgtagcatttcggtcagcagtcatattgcgaatt
cctgaattggttgaactaagcagggagggtgcattccatgtggttatcagtcattttagc
gaagaaagttcccatatcataactgaacttcactctcatccaagaagtctttttctttat
ttaaagacgctcattgagtttcacttatttggcaccctagatttgtctaatttgagcaag
gatgacactatgaatcctctcaatggaaggcaggttaaggatcactctgaaggagttaga
gattacttagagaatatatccaatttccccaagttcatgcgggaaaaacctattcacgtg
cctgatgatcttattgagctttaccttgagttattatgccagtacgaaggtagttcagtt
ctcaagtttctggaaatgtttgatagctatcgagttgaacattgtttacgtctctgtcaa
gaatatggcattatagatgcaactgcgttcttattagaaagggttggtgatgttggtaaa
gctctttcaattacactttctgatcttaatgataaattcgttaagcttgatgctgctgtg
gaagctgtagttttaaaccgtagcagagttggttcttcacatgtggaagtattagacact
gttttaagaacaaaggagggaagtgacatccaagatctattgcgtgcctgtattggtctg
tgtcagcggaacacccctcgtctgaatcctgaggagtcagaagcgcattggtttaaatta
cttgattcgttttgtgacccattgatcgattcaaatgttaaaggagcatatgaaagtaaa
aatcattttggaatgttagctggatcagcagattcacaacaggacaaggacgcctataaa
agcagctggaaaatttcaaagtcccggaatggtcatatcttgagaaaattgctatcacag
ttcattaaagagattgtagagggaatgattggttttgttcaccttccaacaatcatgtct
aagcttctgtctgataatggtagtcaagaatttggtgattttaaacttacaatattggga
atgctgggaacatatggctttgaaagaagaattctggatgctgccaaatcgttgatagaa
gatgactcgttctatacaatgagtttactcaagaaaggggcctctcatggatatgccccc
aggagtctcgtgtgctgtatttgtaattgccttcttacaaagaactctggtagctctgga
attcggattttcaactgtggccatgcaattcatgtccaatgtgaagtttcggaaattgag
gcatcaagcagaggatcttcgtcgggatgccctctatgcatgcctggcaagaaatcccag
cagtcccgaaacaaatcaatcattgcaactaatggcttggtcaacaaattctcatcaagg
cgccagtacccccatggaagtaccatccattctcatgacagtgatttgacagagaatatg
tatgggcagcaacagatatcacggtttgagatcttgagcaacctgcagaaaaatcagaga
tttatgcaaatagaaaacttgcctcagttgaagcttgccccgcctgctgtgtaccatgaa
aaggtaaataaagttgcaaactttctgacaggcgaaagtagcaataattcttctgctatt
gagaaacaaagtagaaacaagcaaaaccgggagctaagagttaagggttcatcaatccga
tttcctttaaaatcaagtatatttggcaaggagaagacaaataagcggtga
DBGET
integrated database retrieval system
