Vigna angularis (adzuki bean): 108347468
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Entry
108347468 CDS
T04660
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00040
Pentose and glucuronate interconversions
var01100
Metabolic pathways
Module
var_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108347468
Enzymes [BR:
var01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
108347468
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
CheR
WG_beta_rep
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
108347468
NCBI-ProteinID:
XP_017442217
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Position
9:29337189..29339940
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AA seq
384 aa
AA seq
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MQILISCTLILALISPCFGSNDASYNVMNFSAVGDGKTDDSAAFSKAWESSCGAEGTPTL
LIPTNYVFLLSALILKGPCKATTILIKLEGKIVAPTKYSWVGDNKESLIAITKVDRLTVD
GTGGLIDGFGSSWWPCKSCPRPSILTFKYCNNLTVHDFTVTNSPKSHIHVHGCENVTFSR
INVTAPADSPNTDGIDVTFSKNVLIQDSSMQTGDDCIAISGGSSLVNVTGIACGPGHGIS
IGSLGKRNDTVEGVHVRNCSLTKTKYGARIKTFPVGIGCAKQITFEEITLVETRYPIFID
KNYGSYRSTDEEVEVSGVTFRGFQGTSFDGKAITFDCGQSGCYNIVLDQIDIVSSLPAKP
ACCSCNNAHGTVTSTVPNCSCLLP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcctaatcagttgcactttgattcttgctttaatttcaccatgttttggaagc
aatgacgcatcttataatgtgatgaattttagtgctgtgggagatggcaaaacagatgat
tcagcagcattttcgaaagcatgggaaagtagctgtggagcagaagggacgccaacttta
ctaattccaacaaactatgtattcttgttgtctgccctaattctaaagggtccttgcaag
gccacgactattctaattaagcttgaagggaaaatagttgcacctacgaagtattcatgg
gtaggtgataataaggagagtttgatcgccatcacaaaggtggacagactgacagtggac
ggaaccggaggattgatagacgggtttggttcttcttggtggccatgcaaaagttgtcca
cgaccatcaattcttactttcaaatattgcaataatcttactgttcatgacttcaccgtc
accaacagtccaaaatctcacatacacgtacatggctgtgagaatgttacgttttctcgt
atcaatgtcactgctcctgctgacagccccaacaccgatggtattgacgttactttttcc
aaaaacgtcttgattcaggattcctctatgcaaactggtgatgattgtattgccattagt
ggtggctcctctttagtcaatgttactgggattgcttgtggaccaggccatggaataagc
attggtagcctaggaaaaaggaatgacacagtggaaggagtacatgtacgaaattgtagc
ttgacaaaaactaaatatggagcaagaatcaaaacgtttccggttggaattggttgtgca
aagcaaatcacttttgaggaaataacgttggtagaaacccgttacccaatatttattgat
aaaaactatggcagttatcgttcaacggatgaagaagtagaagtgagtggggtgacattc
agagggtttcaaggaacatcctttgatggcaaagctataacctttgactgtggacaatca
ggttgctacaacatcgtattggatcaaatagacattgtttcttctctaccagcaaagcca
gcctgttgttcttgcaataatgcccatggaacagttacatctactgttccaaattgttct
tgtttattgccatga
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