Vigna angularis (adzuki bean): 108347491
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Entry
108347491 CDS
T04660
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
var03016
]
108347491
Enzymes [BR:
var01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
108347491
Transfer RNA biogenesis [BR:
var03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
108347491
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
108347491
NCBI-ProteinID:
XP_017442256
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Position
9:23629160..23663231
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AA seq
779 aa
AA seq
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MAVRAVATCSLFRPPSPPLLSSALRLFSSPSRCSCSLRHGAKTYHRSFHSVFDSVMEELR
AARRSRHKRVSAAGSSAGLLNEELVEDRLVNRSLQKGLLLEFKKDSDRVLLAVAQRPDGK
KNWMVSDQNGVTSSIKLQQVTYIIPGIDNFDQADITDFALKAQDNMDPSLLEYAWVELLE
KNKSVTVEELAEIIFGSTEPLDSYTAHLLLSKDEVYFTVLETKGSLSIYGPRPSRQVEEL
IHRKLAKEAAEKEFLEFIELLASVKSMSLQDKPPKSSWTNDEKNWRRIESLVAYAIDSCK
SDEQRKTAGMILKELGLAKTSSSAVKLLIDIGYFPVHINLDLLRSGIPTDHSEEIISAAK
SLLLDTSDPDKIDRKNLTDLKVYAIDVDEADELDDALSATKLQDGRIQVWIHVADPTRYV
QPGSIVDREAMRRGTSVFLPTATYSMFPENLAMGGMSLRQGELCNAVTVSVVLHYDGSIA
EYSVFNSVIKPTYMLTYESASELLHLNLQEEGELRILSEAANLRSNWRRQQGAIETSTLD
TRIKVFNPEDPEPSLKLYVENQADPAMRLVFEMMILCGEAIATFGSQNDIPLPYRGQPQS
DINVSEFSHLPEGPVRSFALVRVMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLA
HYQVKAFLRGELPPFTAGKLEGIAAVINENVRTVRKLCNSSLRYWILEYLRRQPKEKSYR
ALVLRFLKDRIAALLLVEIGFQASAWVPVGSQIGDEVLVKVEEAHPRDDILFLKEVVKE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacgggcagttgccacctgctccctcttccgccctccctctccgcccctctta
tcctccgccctccgcctcttctcctctccctcccgctgctcctgctccctccgtcatggc
gccaaaacctaccaccgctccttccactccgtattcgacagcgtcatggaagagctccgt
gcggctcgcagaagccgccacaagcgtgtctccgccgcgggttccagcgcgggattgttg
aatgaagagcttgttgaagatagacttgtaaaccgttcattgcagaaagggttgcttttg
gaattcaagaaggattctgatagagtattgctagcagtagctcaaagacctgatggcaag
aagaactggatggtttctgatcagaatggtgtcacttcttccatcaaactgcagcaagtg
acatatatcattcctggtattgataattttgaccaagcagatatcacagattttgctcta
aaggctcaggataacatggacccgtctctacttgaatatgcttgggttgagctcctagaa
aagaataagtctgtcacagttgaagagttggccgagataatttttggcagcaccgagccc
cttgacagctatactgctcatctcttgctatcaaaagatgaagtatactttactgtattg
gagactaaaggatctctttccatttacggacctcgaccaagtaggcaggttgaggagctc
attcacaggaagcttgcaaaggaggctgctgagaaagaatttttagagtttattgaatta
ctggcctctgtgaagtccatgtctttacaagataaacctccaaaatcttcctggaccaat
gatgaaaaaaattggaggagaattgagtcacttgtagcatatgctattgattcatgtaaa
agtgatgaacaaagaaaaacagctgggatgatactgaaggaattgggtctggcaaagaca
agttcctcagccgttaaacttctgatagatattggatattttcctgtacatatcaatctt
gatctgttgagatccggaattcccactgatcattcagaagaaatcatatctgctgcaaag
agtcttttattggacacatctgatccagacaagattgacaggaagaatcttactgattta
aaggtctatgccattgatgttgatgaggctgatgagcttgatgatgctttgagtgcaaca
aagttgcaagatggccggattcaagtttggatacatgttgcagatccaactagatatgtt
caacctggaagtatagtggacagagaggctatgagaagaggaacttccgttttcttgccc
actgctacatattctatgtttccagaaaatcttgccatggggggcatgagtttgcgacaa
ggagagctttgtaatgcagttactgtatcagttgtgctgcattatgatggcagcattgca
gaatattcagtttttaactcagtgattaaaccaacatacatgctgacatatgagagtgca
tccgagctactccatttgaatcttcaggaggagggtgagctcagaattttgtctgaggct
gcaaaccttagatcaaattggcgtcgtcaacagggtgccattgagacgtcaactttagat
actcggattaaagtatttaatccagaggatccagagccatcattaaaactttatgtggaa
aaccaggcagatcctgccatgcgtttagtctttgagatgatgatactctgtggagaagct
attgccacgtttggatctcagaatgacattcccttaccatacaggggacagccccaatca
gatataaatgtttccgaattttcccatcttccagaaggacctgttaggagctttgcactg
gtcagggtaatgcgtgcggctgaaattgattttaggaagccagcacgccatggtgttttg
gggattcctggttatgttcagtttacatctcccatccgtagatatttggatcttcttgca
cattatcaagtaaaggcattccttagaggcgagcttccaccctttacagctggtaagctt
gaagggatagcagctgttatcaatgagaatgttagaacagtgaggaaactctgcaacagc
agtcttcgatactggatattagaatatttacgaagacaaccaaaagagaaatcgtatcgt
gcattggttcttagatttttgaaagatcgaattgcagctctattgctggtggagattgga
tttcaagcttctgcctgggtccctgttggatcacagataggggatgaagtattagttaaa
gtggaagaagcgcatccacgtgatgatattctttttctgaaggaggttgtaaaagagtga
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