Vigna angularis (adzuki bean): 108347577
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Entry
108347577 CDS
T04660
Name
(RefSeq) sm-like protein LSM1B isoform X2
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108347577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108347577
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108347577
mRNA degradation factors
5'-3' decay
Lsm complex
108347577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
108347577
NCBI-ProteinID:
XP_017442402
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All DBs
Position
9:3685509..3688277
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFE
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggccctgaggatatttacctttctacttcacttgctagctatcttgac
aagaaacttcttgtattactgagagatggcagaaagctcatggggatacttcgctctttt
gatcaatttgctaatgcagttcttgagggtgcctgtgagagggttattgttggtgatctg
tattgtgacatccctttgggtctctatgtaatccgtggagaaaatgttgttctaatcggt
gagctggacttggagagggaggaacttcccgaacacatgactcgtgtttctacagcagaa
atcaagagggcacagaaagcagaaagggaggcctcagatctgaaagggactatgaggaaa
agaatggaattccttgactttgaatag
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