KEGG   Vigna angularis (adzuki bean): 108347577
Entry
108347577         CDS       T04660                                 
Name
(RefSeq) sm-like protein LSM1B isoform X2
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108347577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108347577
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108347577
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108347577
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 108347577
NCBI-ProteinID: XP_017442402
LinkDB
Position
9:3685509..3688277
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK
RMEFLDFE
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggccctgaggatatttacctttctacttcacttgctagctatcttgac
aagaaacttcttgtattactgagagatggcagaaagctcatggggatacttcgctctttt
gatcaatttgctaatgcagttcttgagggtgcctgtgagagggttattgttggtgatctg
tattgtgacatccctttgggtctctatgtaatccgtggagaaaatgttgttctaatcggt
gagctggacttggagagggaggaacttcccgaacacatgactcgtgtttctacagcagaa
atcaagagggcacagaaagcagaaagggaggcctcagatctgaaagggactatgaggaaa
agaatggaattccttgactttgaatag

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