Vigna angularis (adzuki bean): 108347664
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Entry
108347664 CDS
T04660
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108347664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108347664
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
108347664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
108347664
NCBI-ProteinID:
XP_017442582
UniProt:
A0A8T0LE73
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Position
1:complement(48472601..48477593)
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AA seq
689 aa
AA seq
DB search
MPPVKDALLLLLDVGPSMDSVLPEIEKACSLLVQKKMIYSKNDEVGIVLFGAEDTDNELT
TEVGGYQHVVVLKKIKVVDGDIHEALQQLPRGTTDGDFLDAVIVGMDMLIKKFDQTNKGK
KRLCLITNAQCPIKEPYEGTKEEQVTIIAKQLTAHGMKMESIIFRGKLGQDANREIMDEN
DHLLNIFSKETSTRLLYLENPISLFGALRTRNITLVTTFRGDLEISQKLSIKVMVYKKTA
EEKFPTLKKYSDKAPPSAQYATHELKIDYEYKSSEDRDKVLPPDQRIKGYPYGPQIVPIS
RSEWDAVKFQPEKGVKLLGFTDSSNIFRHHYMKDVYVFLPQPGNTGAMLALSALARAMKE
MDKVAILRCVWRKGQSNVSIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFSNFP
ASWKPNGQQLEAAANLIKTLDLAPHGQPEVLLPDFTTNPVLERFYRFLELKSKDPDVAVP
PIDDTLKKITEPDADLLLQNKSVIDSFCRSFELKGQPLKKSRRLWGGKRSSTNDVIENAS
VKVEKIGDLTPAQNASVKVEKIGDLTPAQDFEALISRRDSPDWVVKAINEMKNKIFDLVE
DSHEGDNYPKAFECLVVLRKGCILEQEPKQFNDFLKHICNFCRENRLHSFCQYLASKDLT
LISKTEAVDSDVTDEEARSFLVESEPKVE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcctccggtcaaggatgcgttgcttttgttgcttgatgtgggcccatccatggattct
gttcttcctgaaattgagaaagcctgctccttgcttgtacaaaagaagatgatctatagc
aaaaatgatgaagtgggaatagtcttatttggagctgaagacactgataatgaactaacg
acggaagtgggtgggtatcaacatgttgtggttttaaaaaagattaaagttgtggatgga
gatattcatgaggctttacaacagctgcctcgaggaacaactgatggtgattttcttgat
gctgtcattgttggcatggatatgttgataaaaaaatttgatcaaacaaataaaggaaag
aaacgtctctgtcttattacaaatgcacaatgtccaataaaagaaccttatgaaggcaca
aaggaagagcaagttaccatcattgccaaacaactgactgcccatggtatgaaaatggaa
agtattatttttagaggaaagcttggtcaagatgcaaacagggaaataatggatgagaat
gatcacttgttaaatattttttccaaggaaacatcaacaagattgttgtatttggagaat
ccaatttctttgtttggtgctcttagaacaagaaatataacacttgttacaactttcaga
ggggatctcgaaatcagtcaaaaattgagcattaaggtaatggtatacaagaaaacagca
gaagagaaatttcctacactgaagaaatattctgataaggctcctccaagtgctcaatat
gctacacatgaactcaaaatagattatgagtacaagagttctgaagatcgtgacaaagtt
ctcccccctgaccaaagaattaaaggctatccttatgggcctcaaatagttcccatatcc
cgttctgagtgggatgctgttaaattccaaccggaaaagggtgtgaagcttttgggattt
actgattcttctaatatatttagacatcattacatgaaagatgtatatgtgttcctacct
caacctggaaatacaggagccatgcttgcactttctgctcttgcacgagccatgaaggaa
atggataaggtggcaatattacgctgtgtctggagaaagggacaatcaaatgttagcatt
ggggtcttgacacctaatttatctgataaagaaaatattcctgattcattttacttaaat
gtacttccttttgccgaggatgttagagagtttcaattcccttccttctctaatttccca
gcttcgtggaagccaaatggacaacagctagaggctgcagctaacttaataaaaacgctt
gatcttgcaccacatgggcaaccggaagttttgctacctgactttacaacaaatccagtg
ttagagcgcttttatcgtttccttgagctgaaatcaaaggatcctgatgtggcggtacct
cctattgatgacacactcaagaaaattacagagcctgacgccgacctgcttttgcaaaat
aaatctgtaatagactcattttgcaggtctttcgagcttaagggacaaccgttgaaaaag
tctaggcgattatggggagggaagagatcttctacaaatgatgttattgaaaatgcatct
gttaaagttgagaaaatcggagatctgactcctgctcaaaatgcatctgttaaagttgag
aaaatcggggatctgactcctgctcaagattttgaagccttgatttcccgcagagatagt
ccagattgggttgtaaaagcgatcaatgaaatgaaaaataaaatatttgacctggtggag
gactctcacgaaggtgataactatcctaaagcatttgaatgtttagttgtgcttcgcaag
ggttgcattcttgagcaggaaccaaaacagttcaatgatttccttaaacatatttgtaat
ttctgtcgagagaatagacttcacagtttctgtcaatatcttgcttctaaggatctcacc
ttgatctccaaaacagaagctgtagacagtgatgttactgatgaggaagccagaagtttc
ttggttgaatctgaaccaaaagttgaatga
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