Vigna angularis (adzuki bean): 108347871
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Entry
108347871 CDS
T04660
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108347871
03083 Polycomb repressive complex
108347871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108347871
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108347871
Histone modification proteins
HAT complexes
HATB complex
108347871
HDAC complexes
Sin3A-HDAC complex
108347871
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108347871
PRC2.2
108347871
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108347871
Heterochromatin formation proteins
Other heterochromatin formation proteins
108347871
Chromatin remodeling factors
NuRD complex
108347871
NuRF complex
108347871
NuRF complex (fruit fly)
108347871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD_LRWD1
eIF2A
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
108347871
NCBI-ProteinID:
XP_017442812
UniProt:
A0A0L9T389
LinkDB
All DBs
Position
1:44991169..44994476
Genome browser
AA seq
425 aa
AA seq
DB search
MGKEEEEMRGEIEERLINEEYKIWKKNSPFLYDLVITHALEWPSLTVEWLPDRHEPAGKD
YSLQKVILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQIIQ
QINHEGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISAPLHIFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KAAAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaggaggaagagatgaggggtgagattgaggagcgactgataaacgaggag
tacaagatatggaagaagaatagtccttttctgtatgatctggtgattacgcatgcgctt
gagtggccttccctcaccgtggagtggcttcccgaccgccatgaaccagccggcaaagac
tactcgctgcagaaggttatattgggcacccatacctctgagaatgagcccaattacctc
atgttggcccaggtccaacttccccttgacgatgctgagaacgatgcccgtcactacgac
gacgaccgccccgacatcggcggctttggctgtgccaatggcaaagttcagatcatccag
cagatcaaccatgagggtgaggttaacagggctcgctacatgccccagaaccccttcatc
attgccaccaagactgttagtgctgaagtttatgtctttgactacagcaagcacccctct
aagccccctcttgatggggcctgtaaccctgatttgaggctcaggggtcacaacactgag
ggttatggcttgtcctggagtaagttcaagcaggggcacttgcttagtggttctgatgat
gctcagatttgtttgtgggatattaatgccactcccaagaataagaccctcgaggcaatg
cagatatttaaggtacacgaaggtgttgtcgaagatgtggcttggcatttgaggcatgag
tacttattcggttctgtgggtgatgatcaatacttgcttatatgggaccttcgaacgccg
gctgtcaccaagcctgtccaatctgtggttgcccatcaaagtgaggttaactgcttggcc
ttcaatccttttaacgaatgggttgttgctactggttctacggataaaactgtgaagttg
tttgatctgcggaagatcagcgctcccctgcacatcttcgattctcacaaggaggaggtt
ttccaggttggatggaatccaaagaatgaaactatcttggcttcttgttgtctgggtagg
aggctcatggtgtgggatcttagcaggattgacgaagagcagtcaccagaagacgcggaa
gatggtccaccagaattgctctttattcatggtggtcatacaagcaaaatatctgacttt
tcctggaatccatgtgaagattgggttgttgctagtgtcgctgaagacaacatacttcaa
atatggcagatggcagagaacatataccacgacgaagatgatctgccagaagagtcaacg
aaagccgcagcttcgtaa
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