Vibrio astriarenae: GT360_00650
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Entry
GT360_00650 CDS
T06574
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vas
Vibrio astriarenae
Pathway
vas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT360_00650 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vas03021
]
GT360_00650 (rho)
03019 Messenger RNA biogenesis [BR:
vas03019
]
GT360_00650 (rho)
Transcription machinery [BR:
vas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GT360_00650 (rho)
Messenger RNA biogenesis [BR:
vas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GT360_00650 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
OB_RNB
AAA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QIA62151
UniProt:
A0A7Z2T0M1
LinkDB
All DBs
Position
1:127024..128286
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AA seq
420 aa
AA seq
DB search
MNLTELKNRPVSELVKLGESLGLENLARLRKQDIIFSILKAHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKDGERYFALLKVNTVN
HDKPDNARNKILFENLTPLHANERMVMERGNGATEDITARILDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAHNHPECELMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF
NRSGTRREELLTKNDELQKMWILRKIVHPMGEIDAMEFLIDKLAMTKTNDEFFDAMRRQK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacagaactgaagaacagacctgtgtctgagcttgttaagctgggcgaaagc
ttagggttagaaaaccttgctcgcttgagaaaacaagacattatcttctccatcctaaaa
gcacacgcaaaaagtggtgaagacatttttggcgatggggttctagagattcttcaagac
ggttttggtttccttcgcagcgcagacagctcttaccttgctggcccagatgacatctat
gtctctccaagccaaattcgtcgtttcaacctgagaacaggtgactcgattgccggtaag
attcgcccgccaaaagacggtgaacgttacttcgcattgttgaaagttaacacggttaac
catgacaaacctgacaatgctcgaaataagattctgtttgaaaacctgacgccactgcac
gctaatgagcgtatggttatggagcgcggtaacggtgcgacagaagatattacagctcgt
atcctagatttagcgtcacctatcggtaagggtcaacgtggtctaatcgttgctccacca
aaagcgggtaaaacaatgctgctgcaaaacattgcacagagcattgcccacaaccaccca
gaatgtgagctaatggtgcttcttatcgacgaacgtccagaggaagtaactgagatgcaa
cgccttgttaaaggtgaagtcgttgcatcgacattcgatgaaccagcgtcacgtcacgta
caagtggcagagatggttatcgaaaaagccaagcgtctagttgaacacaaaaaagacgtg
gtgatccttctagactcgatcactcgtctagctcgcgcatacaacaccgtagtgccatca
tcaggtaaggtactgactggtggtgttgatgcgaacgcactgcaccgtccaaagcgtttc
tttggtgcggcacgtaatgtagaagagggtggtagcttaacaatcatcgcaactgctctg
gttgatactggctctaagatggacgaagttatctacgaagagttcaagggtacaggtaac
atggaactgcacttgaaccgtaagatcgctgaaaaacgtgttttccctgcgattgacttt
aaccgcagtggcactcgtcgcgaagagcttctgactaaaaatgatgagctgcagaagatg
tggattctgcgcaagattgttcacccaatgggcgagatcgatgcaatggagttcctcatc
gacaagctagcgatgacgaaaaccaacgacgagttctttgacgcgatgcgtcgtcagaaa
taa
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