Vibrio astriarenae: GT360_01760
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Entry
GT360_01760 CDS
T06574
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vas
Vibrio astriarenae
Pathway
vas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GT360_01760 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vas03021
]
GT360_01760 (rpoA)
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_01760 (rpoA)
Enzymes [BR:
vas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GT360_01760 (rpoA)
Transcription machinery [BR:
vas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GT360_01760 (rpoA)
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GT360_01760 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QIA62334
UniProt:
A0A7Z2T0Y6
LinkDB
All DBs
Position
1:355075..356067
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEVLLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIVNPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgatatcgaacaaatcagc
acgactcacgcaaaagtaactcttgagccattagagcgtggtttcggccatactcttggt
aatgcacttcgccgtattctactatcttctatgccaggttgtgctgtaacagaagtagag
attgaaggcgtactacacgaatacagcactaaagaaggtgttcaggaagatattcttgaa
gttcttcttaaccttaaaggtcttgctgttcgcgttgccgaaggcaaagatgaagtgttt
attacgttgaacaaatcaggctcaggccctgtggttgcaggtgacatcacccatgatggt
gatgtagagatcgtaaaccctgaacacgtaatttgtcacttaactgatgacaatgctgag
atcgctatgcgcatcaaagtagaacgtggtcgtggttacgttccagcttcagctcgtatc
catactgaagaagatgagcgtccaattggtcgtctgctagtagacgcgacttacagccca
gtagacaaaattgcctacgcggttgaagcagctcgtgttgaacagcgtactgacttggac
aagcttgttatcgatatggaaacgaacggtactcttgagcctgaggaagctatccgtcgc
gcagcaactattcttgctgagcaattggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccgatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatcttgtacagcgcactgaggttgagctacttaaaacgccaaaccttggtaaaaaatct
cttactgagattaaagacgtacttgcatcacgtggtctttctctgggcatgcgcctagaa
aactggccaccagcgtctatcgctgaagattaa
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