Vibrio astriarenae: GT360_02350
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Entry
GT360_02350 CDS
T06574
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vas
Vibrio astriarenae
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vas03021
]
GT360_02350 (rapA)
Transcription machinery [BR:
vas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GT360_02350 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Helicase_RecD
WWE
FliT
Motif
Other DBs
NCBI-ProteinID:
QIA62435
UniProt:
A0A7Z2YCX1
LinkDB
All DBs
Position
1:455247..458156
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AA seq
969 aa
AA seq
DB search
MTFAIGQRWISDTESDLGLGTVVAVDARTVTVMFAASEDNRVYARNDAPVTRVIFNVGDT
VESQQGWTLTVDEVIEEDGLVSYVGTREDTQESGVVLREILLSNQIRFNKPQDKLYAGQV
DRMDNFVLRYRALQNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLAGRAERILIVVPETLQHQWLVEMLRRFNLHFSVFDEERCIEAFA
EADNPFDTQQLVLCSLDFLRKSRKRFEQALEGDWDLLVVDEAHHLEWSEEKPSREYQVIE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDADRFFDYQAFVQEEEQYAPVADAVASLF
TGEQLSNDAKNQITELLSEQDVEPLFRIIENDADEESCANARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPKRMVNLMPMAIPSQYNTSMRVAGMLGGKMSDEARALKNLYPEEIFQEFE
GDESSWWQFDPRVDWLIEKVKDKRSDKILVIASRAATALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQQNDIDVHVPYLEGTSQGILARWFNEGLNAFAETCPTGRTVYEQHSGALIKMLASGD
ITELDDVIEQSHKMNQELKAQLEQGRDRLLEMHSNGGEKAQKIVDQISATDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMLVPSYPGLPYEGATITFDRDTALSREDMNFISW
EHPMIQGGIDLIMSEGVGTSAVSLLKNKALPVGTILVELVYCVDAQAPKRSGISRFLPKT
PIRLMMDQRGNDLSAQVEFDSFNRQLSPVNRHLASKLVNSVQAQIHTMIEAGDKAVTEPV
ERIRQQAKQDMHASLNAELERLQALKAVNPNIRDEEIVAIEEQINQLDSYIEKAQYQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctattgggcagcgttggattagcgatacggaaagcgatttagggttaggg
acagtagtagcagttgatgcgcgcacagtcacagtgatgtttgctgcatcagaagataat
cgcgtatacgcacgtaacgatgcgccagtgacacgagtgattttcaatgtgggtgatacc
gtggagtcacaacaaggttggacactgacagttgatgaagtgattgaagaagatggactc
gtgagttacgtcggtacacgagaagatacgcaagagtcaggtgtcgtacttcgtgagatc
ttgctgagtaaccagattcgattcaacaaaccacaagacaagttatatgcaggtcaagta
gaccgtatggataactttgttctgcggtaccgcgcactacagaatcaatatcaacaacat
aaaagtccaatgcgtggcctttgtggcatgcgtgcaggtcttattcctcaccagctctac
attgcccatgaggttggtcgccgtcatgcgccacgcgtgttgctggcagatgaggtaggc
cttggtaaaaccatcgaggccggtatgatcattcaccagcaggtgttagccggtcgtgca
gagcgtattttgattgtggtaccggaaactctgcaacatcagtggctagtagagatgctt
cgtcgtttcaatcttcatttctctgtttttgacgaagagcgttgtattgaagcctttgcc
gaggcggataacccgtttgatactcagcaactggttctgtgttctcttgatttcctacgt
aaaagtcgtaaacgtttcgaacaggcattggaaggggattgggatctactcgttgtcgat
gaggcgcaccacctagagtggagtgaagaaaagccaagcagagaatatcaagtcattgaa
ggtttagctgagcgaacgccaggcgtattgcttctgacagcaacaccggagcagcttgga
cgagaaagccactttgcccgtcttcgtcttttggatgccgaccgcttttttgattatcaa
gccttcgtgcaagaggaagagcaatatgctcctgtggctgatgctgtcgcctctctcttt
actggtgagcagctctcgaacgatgcaaagaaccagattaccgagctactttctgagcaa
gacgtcgagccactgttccgtattatcgaaaatgacgctgatgaagagtcatgtgctaat
gctcgccaggagctgatcgataatcttatggatcgtcatggtacaggtcgcgttctattt
agaaacacacgtgctgcgattaaaggtttccctaagcgtatggttaacctgatgcctatg
gcgattccatcgcaatacaacacgtcaatgcgtgtcgcgggcatgctgggtggcaaaatg
agtgacgaggcacgcgcactcaaaaacctatacccagaagaaattttccaagagtttgaa
ggtgacgaatcaagctggtggcagtttgatccgcgtgttgattggctgattgagaaagtt
aaagacaaacgcagtgacaagatcttggtgattgcgtcgcgagcagcaacggccctacaa
cttgaacaggcactgcgcgagcgtgaaggtattcgtgcgacggtattccacgaaggaatg
tcgattcttgaacgtgataaagctgcagcttactttgcgcaagaagagggcggtgcacag
gttcttatctgtagtgaaattggctcggaaggtcgcaacttccagttcgcaaatcagctc
gtgatgtttgatttgccgtttaacccagacctgcttgaacagcgcattggccgcctagac
cgaattggtcagcaaaatgatattgacgttcacgtcccatacctagagggaacatcacag
ggtattttggctcgctggtttaacgaggggttgaatgcgtttgcggaaacttgccctact
ggccgcaccgtttatgaacaacactcaggtgcactgataaagatgctggcatcgggtgat
atcactgagcttgatgatgtgattgaacagtcacataaaatgaatcaagagctaaaagca
cagcttgagcaaggtcgagatcgcctacttgagatgcactcaaatggaggcgaaaaagca
cagaagattgtcgaccaaatctcggcaaccgatggcgacaccaacttggtgacatttgcg
ctaagcctcttcgacactattggcctaaaccaagacgacaaaggcgagaatgctctagtg
gtgacaccatcagagcacatgctggtgccaagctacccaggacttccttatgaaggtgca
acaatcaccttcgatcgcgatactgcactatctcgagaagatatgaacttcatcagctgg
gaacatccgatgatccaaggtggcatcgatttgatcatgagtgaaggcgtaggtacgtcg
gccgtttctctcctgaagaataaggcattgcctgttggcaccattttggtagagctggtt
tactgtgtggatgctcaagcgccaaaacgttctggtattagccgcttcttaccgaaaaca
ccgattcgtttgatgatggatcagcgtggaaatgatctttcggcacaggttgagtttgac
agttttaatcgtcagttaagtccagtgaaccgtcacctggcaagcaagctggtcaattca
gtgcaagctcagatccacacgatgattgaagcgggcgataaggcagtgacagaaccagta
gagcgtattcgtcagcaagcgaaacaagatatgcatgcgagcttgaatgcagagcttgaa
cgacttcaagcgctaaaagcggtgaatccgaatattcgtgatgaagaaattgttgcgatt
gaagagcagattaatcagctagatagctacattgagaaagcacaatatcaattagactcg
ctgcgcttgattgtggtatctcataactaa
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