Vibrio astriarenae: GT360_05295
Help
Entry
GT360_05295 CDS
T06574
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
vas
Vibrio astriarenae
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vas03016
]
GT360_05295 (rnd)
Enzymes [BR:
vas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GT360_05295 (rnd)
Transfer RNA biogenesis [BR:
vas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GT360_05295 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QIA62966
UniProt:
A0A7Z2T2B2
LinkDB
All DBs
Position
1:1098153..1099274
Genome browser
AA seq
373 aa
AA seq
DB search
MKYQIIKSQEALVSVCEAARQAEKVMLDTEFVRIRSYFPKLGLVQLFDGEQLSLIDPLEL
SDLTPLAELLADESVLKVLHACGEDLEVFQNDLGCLPTPMVDTQIMAAFLGHGLSTGFAS
LVNEYLGVELDKSESRADWTARPLTAKQLDYAAADVHYLWPLHDILVDKLAETPWESAAL
EESASLALKRIKNIDITKLYRDIKGAWQLKPRQLAVLQPLAAWRYKEAVKRDLALNFVFK
ENELLDIASQGVTSTKTMEKMGIDPRSIRRHGEKIVHIVKKAQKTPQEDYPAPITRVVDL
PGYKQEFKLLKDQVKKVSSNVGLATEFLASKKQLNQFIRWVKDHDMAAERTPDVMRSWRL
ECFENSLVTLLKK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgaaataccaaatcataaagagtcaagaagcgctggtttcagtttgtgaagccgcacgc
caagcggagaaggtaatgttggatactgagtttgttcgtattcgttcttacttccctaaa
cttggtttagtgcagctgtttgatggtgagcagttatcactgatagacccccttgagctg
agtgatttgacgccattggctgaactacttgctgatgaatctgtactcaaagttctacac
gcatgtggtgaagaccttgaggtattccaaaacgatcttggttgtctaccgactccaatg
gtggatacgcaaattatggccgctttccttggtcatggcctatcgacggggtttgcaagt
ctagtcaatgaatatttgggtgttgagctggataaatcggagtctcgagcagattggaca
gcacgtccattgacagccaagcagttagattatgccgctgcggacgttcactacctttgg
cctttacacgacattttagtggataaattagccgaaacgccttgggagtccgcagcactt
gaggagtcagcgtcattggctctcaagcgcattaaaaacatcgatatcactaaattgtat
cgcgacatcaaaggtgcatggcagctaaagccaagacaacttgcggtattacagcctctt
gcagcatggcgttacaaggaagccgttaagcgtgacttagcacttaattttgtatttaaa
gagaacgagttactcgatattgccagccaaggtgtcacatcgaccaaaacaatggagaag
atgggcatcgatccgcgctcaattcgccgtcatggtgagaagattgtccacatcgtcaaa
aaagcacaaaagacacctcaagaagactaccctgcgccgattacccgtgtggttgatctc
ccaggttacaagcaagagtttaaactgcttaaagaccaggttaagaaggtcagctctaac
gtcggattagcaacagagtttttagcgtcgaaaaagcagctcaatcagtttatccgttgg
gttaaagatcatgatatggcagcagagcgtacgccagacgtaatgagaagttggcgttta
gagtgctttgaaaactcgttagtgaccttgctgaaaaagtaa
DBGET
integrated database retrieval system
