Vibrio astriarenae: GT360_07590
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Entry
GT360_07590 CDS
T06574
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vas
Vibrio astriarenae
Pathway
vas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GT360_07590 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_07590 (sbcB)
Enzymes [BR:
vas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
GT360_07590 (sbcB)
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GT360_07590 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GT360_07590 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GT360_07590 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QIA63389
UniProt:
A0A7Z2T2Y4
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All DBs
Position
1:1585570..1586997
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AA seq
475 aa
AA seq
DB search
MPADNQPTFFFFDYETWGTSPALDRPSQFAGVRTDENFNIIGEPLVIYCQLPSDYLPSPE
AALITGITPQKANAEGLPEPEFIRRIHEELSKPNTTSLGYNSIRFDDEVTRHTCYRNFLD
PYAWSWQNGNSRWDLLDVMRACHALRPDGINWPENDEGYPSFKLEHLSVANGIEHSNAHD
AMADVIATIEMAKKIKTAQPKLFDFFLQYRHKRKLNELIDIVEMKPLMHVSGMLGRDCQY
TSWIVPVAWHPTNKNAVIVVDLAQDVSPVLEMDSDSLRERLYTKRSELADDELPVPIKLI
HLNKCPILAPAKTLTAENAANIGINREQCLANLALLRQHPEIREKLLSLYQQERDYSDEN
KDVDAMLYDGFFSPADRAAMDIILSQPPEALGSLDISFDDGRIKPLLFRYRARHYPWTLT
ETEQQRWMSHCRDYFETRLPDYTLNLENLAHEHETDEHKMRVLKSVYEYVSKLVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagataaccaaccgacttttttcttcttcgactacgaaacttggggcactagc
cctgctcttgacagaccgagtcaatttgccggtgtccgtaccgatgaaaactttaacatc
atcggtgagccactggttatctattgtcagttgccatccgactatctgccctctcctgaa
gctgcgctgatcacaggcatcacaccgcaaaaggcaaatgctgagggacttccagagcct
gagttcatccgccgtattcatgaagaattgtctaaaccgaacacaacaagcttaggctac
aacagtattcgtttcgatgacgaagtgacacgtcatacctgttaccgtaactttctagac
ccatacgcatggagttggcaaaacggtaattctcgttgggacttgcttgatgtgatgcga
gcttgtcatgcccttcgtcctgacggaatcaattggcctgaaaatgacgaaggctaccca
agctttaaacttgaacatctttcagttgccaatggcatcgaacatagcaacgcccacgat
gcgatggctgatgtgattgcgacgattgagatggcgaaaaaaataaaaacggcgcaaccc
aagttattcgactttttcttgcaatatcgtcacaagcgtaagctcaatgagcttattgat
atcgttgagatgaaaccattgatgcacgttagcggcatgctgggacgtgattgtcagtac
accagttggattgttccggtggcatggcaccctaccaataaaaacgccgtaatcgtggtg
gatttagcccaggatgtatctccggttcttgagatggactcagacagcttaagagagcgt
ttatatacaaaacgttctgaacttgctgacgacgaattgcccgttccaatcaagctcatc
cacctcaataaatgccctattctcgcaccagcaaaaacactgactgccgaaaatgcggca
aatatcggaattaaccgcgagcagtgtcttgcaaacctcgcactattgagacagcatcca
gaaattcgtgaaaagctgttgtcgctgtatcagcaagaacgtgactattctgatgagaat
aaagatgttgatgcgatgctctacgatggcttctttagccctgcagatcgtgccgctatg
gacatcattcttagccaaccacctgaagcgcttggcagcttagacatctcttttgatgat
gggcgaattaagccgttactattccgctatcgtgctcgacattatccatggacactcacc
gaaacagaacagcaacgttggatgagtcattgtcgcgactactttgagactcgcttaccc
gactacacactcaacttagaaaacttagcgcatgagcatgagactgatgaacacaaaatg
cgcgtgttgaagtcggtctatgagtacgtttctaaattggttagctag
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