Vibrio astriarenae: GT360_09075
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Entry
GT360_09075 CDS
T06574
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vas
Vibrio astriarenae
Pathway
vas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GT360_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vas03000
]
GT360_09075
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_09075
Enzymes [BR:
vas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GT360_09075
Transcription factors [BR:
vas03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GT360_09075
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GT360_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HTH_23
DUF6233
HhH-GPD
DnaB_bind
NUMOD1
DUF6967
Motif
Other DBs
NCBI-ProteinID:
QIA63658
UniProt:
A0A7Z2T3E6
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All DBs
Position
1:1929268..1930629
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AA seq
453 aa
AA seq
DB search
MPLSNRDQYRTARLSRDRRFDGQFFVAVKTTGIFCRPICPANLPKEENVDYYANAAGALR
DGFRPCKRCHPDSAPTSWRWLGVETTFQRAVSEVESGYLQQHSIQSLADKLGISDRYLRK
LFERYLGLAPKQYALYQQLMFAKRLLHSSQLSITDVGYASGFNSTRRFNDAFINTLKLTP
SELRKAGTTSHSNRLSIAVRTPYDWRHLLDFYALRAIEGIEKIESTRYSRYCLLESTKAW
FSVDFAPLEQGKFFVDVEFELDDIRQLRTLIQQIRRVFDLDTDVTTVEESLSKIAPELVK
HSGIRIPGVWDHWEAGVRAIVGQQVSVKAAIGQLNLLVSTLQNGDIKYFPTPQELIDNDL
GFLKMPISRKEALKRFALFMSQHWHCTPDNWIEIKGVGPWTINYAKIRGLSDPNCFLDSD
LVVKKALINYPHLTQQSVSPWGSYATFHCWSHA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccactttccaatcgtgaccaataccgaacggcccgcctttcacgtgatcgacgcttt
gatgggcagttttttgttgcggttaaaaccacagggatattctgtcgtcctatctgcccg
gccaatttacccaaagaagaaaatgtcgactattacgctaacgcagcaggcgcacttaga
gatggatttcgcccgtgcaaacgctgccaccctgatagtgcaccgacttcttggcgatgg
ttaggggttgaaaccacttttcagcgtgcagtcagtgaagtggaaagtggataccttcaa
cagcattcaatccaatcgttggctgataagctaggtatcagtgatcggtacttgcgtaaa
ttattcgagcgttatttgggtttagctcctaaacagtacgctctgtatcaacaactgatg
tttgctaagcgattgctgcatagcagccagctttctatcaccgatgtgggttatgcatca
gggtttaacagcacacgccgcttcaatgatgcatttataaacacattaaagctaacaccg
agcgaattaagaaaagcggggacaacctctcatagtaatcgcttatctatcgcagtgaga
acaccctatgattggcgacaccttctcgacttttatgcgctgagagccatcgaaggcata
gaaaaaatagaaagcactcgctatagccgctattgcttgctagagagcacgaaagcctgg
ttctctgtcgactttgctcccctagagcaaggaaaattttttgtagacgtcgaatttgag
ctcgatgacatacgtcaattacgcactctgattcaacaaatacgccgagtattcgacctc
gatactgatgttactacggtcgaggaatcactctctaagattgcacctgagctcgttaag
cattcgggaattcgcatacctggagtgtgggatcattgggaggcaggagtaagagcaatt
gttggtcagcaagtttccgtcaaagctgccattggtcaactcaacctgttggtgtccact
ttgcaaaatggggatataaagtacttccctacaccgcaagagttgatagataacgatctt
ggcttcctaaaaatgccaatctcgcgtaaagaggccttaaaacgctttgcgctatttatg
agtcaacattggcattgcacacccgataactggattgagataaaaggcgttggcccttgg
acaatcaactatgccaaaattcgcggcttatctgacccaaattgttttcttgatagtgat
ttagtggtgaagaaagccctcatcaactatccacatttaactcagcagtccgtttctccg
tggggaagctatgccacctttcattgttggagccatgcttaa
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