Vibrio astriarenae: GT360_10000
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Entry
GT360_10000 CDS
T06574
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vas
Vibrio astriarenae
Pathway
vas05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
GT360_10000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vas03000
]
GT360_10000
Transcription factors [BR:
vas03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GT360_10000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QIA63833
UniProt:
A0A7Z2T444
LinkDB
All DBs
Position
1:2141770..2142654
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AA seq
294 aa
AA seq
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MKLDDLNLFRLVVENGSYTSTSRKTMIPVATITRRIQALEESLNLRLLNRHARKLSLTEA
GERFYQECSPLLKTLSTTAELLSDSCRGAAGRIKIAAPSNLTKRMIMPLFNAFMLQYPEI
NIELMTTNHFDQLDPTEWDVIFRVGSLRDSSLIARKVGAVEDILVASPSYLAKKQAPSHA
EDLAEHSLLKGHPLLKWQLTNSSGEHVVNLDKGRFEADSLDTVRRACAEGLGITLMPDVM
IREYMQRGELVRVLSDWHANPRDIFMLYNHKDRLPEKVRLFIDFVIDYIETNKR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagatgacctaaacctttttcgactggttgttgaaaatgggagctacacctca
acatcacgcaaaacaatgattcctgttgcgacgataactcgacgcatccaagctttggaa
gagtctcttaatctgcgccttcttaatcgtcatgcacgcaaattgtcactcactgaagct
ggtgagcgcttttaccaagagtgctctccactgctcaaaaccctttcaacgactgcggag
cttctttctgattcgtgccgtggggctgctggacgcatcaagattgctgctccatctaat
ctaactaagcgtatgatcatgccgctgtttaatgcgttcatgcttcagtacccagaaatc
aacattgagttgatgacgaccaatcactttgaccaactcgaccctactgagtgggacgtt
atttttcgcgtggggtcactacgtgattcaagcttaatcgcgcgtaaagtgggtgcggtt
gaagatatcttagtggctagcccaagctatcttgcaaagaagcaggctccaagccatgca
gaagaccttgcagaacattcattgcttaaagggcatccgcttctcaaatggcagctaacc
aacagttcaggtgaacacgttgtcaacttagacaagggccgctttgaagccgactctctc
gatactgtacgtcgcgcttgtgcggaagggctaggtatcaccctgatgcccgacgttatg
atcagagaatacatgcagcgtggtgagcttgtgcgtgtcctctccgattggcacgcaaac
ccacgagatatctttatgctgtacaaccataaagaccgcctaccagagaaagtccgtcta
tttatcgattttgttatcgactacatagagaccaacaagcgctaa
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