Vibrio astriarenae: GT360_10835
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Entry
GT360_10835 CDS
T06574
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vas
Vibrio astriarenae
Pathway
vas03030
DNA replication
vas03430
Mismatch repair
vas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT360_10835 (dnaE)
03430 Mismatch repair
GT360_10835 (dnaE)
03440 Homologous recombination
GT360_10835 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vas03032
]
GT360_10835 (dnaE)
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_10835 (dnaE)
Enzymes [BR:
vas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT360_10835 (dnaE)
DNA replication proteins [BR:
vas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GT360_10835 (dnaE)
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GT360_10835 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QIA63969
UniProt:
A0A7Z2T407
LinkDB
All DBs
Position
1:complement(2300411..2303890)
Genome browser
AA seq
1159 aa
AA seq
DB search
MADPKFIHLRIHSDFSMVDGINKVPPLVNKVAELGMPAMALTDFTNLCGLVKFYGNAHGK
GIKPIIGADFAMQSDEFGDELTSLTVLAADNDGYKNLTLLISQAYLRGHVQHQPVIDKAW
LADHAKGLIVLSGGKNGEIGRALLKGNQALAKQCGDFYQQHFFDRFYLELTRTGRADEES
YLHFAIEFAEQYDFPVVATNEVVFIDQDLFEAHEIRVAIHDGFTLDDPRRPKNYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMEETDFLVKKSQEGL
EERLEFLFPDPEVRAERRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLIPPDPGMTLEKAFKAEPA
LPELYERDEEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAPIYADSEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLEKEGLAPVRIESIPLEDETSFNLL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRATFEEGAVENGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECLRMKLKVLPPDINAGLYRFNVDEKGAIVYGIGAIKG
VGEGPIDAILEAREKDGYFKDLFDFCARIDLKKVNKRVIEKLIYAGALDRLGPHRAALMA
SLDDAVKAAAQHHQAEAFGQSDMFGVLTDAPEEVEHKYIQVPPWPEKVWLEGERDTLGLY
LTGHPVNEYLKELDKYTSCRLKDATPTRRDQTVTLSGLVIAARVMTTKRGTRIGIMTLDD
RSARIEVMLFSDALEKYADLLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKFA
RGLSISINESQINETFFERFSQILEPHRAGSVPVHVYYQRSDARTRITMGTQWRVTPSDK
LLDELKQLLGKRQVELEFH
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctaaatttattcaccttcgcattcacagtgacttttccatggtggacgga
atcaataaagttcccccattggtcaataaagtggctgagctcggtatgccggcaatggcg
ctcactgactttaccaacctttgtggcttggtgaaattttatggcaatgcgcatggtaag
ggcatcaaaccgatcattggtgcagactttgcgatgcagtctgatgagtttggtgatgag
ttgacctctctaacggtgcttgctgccgacaatgatggctataagaatctgacgctgctg
atttcacaggcctatcttcgcggtcacgttcaacaccagccagtgattgataaggcctgg
cttgccgaccatgcgaaaggactgattgtcctttctggtggtaaaaatggtgagattggc
cgcgctctactcaagggcaatcaagcgcttgctaagcagtgtggtgatttttatcagcaa
catttttttgatcgtttctacttggagttaactcgaacgggtcgagcggatgaagagagc
tatcttcactttgcgatcgagtttgccgagcaatatgattttccggttgtcgccaccaac
gaggtggttttcattgaccaagatctgtttgaagcgcatgaaatccgtgtcgcgatacac
gacggttttaccctagatgatcctcgccgaccaaaaaactatagccctcaacaatatctt
cgcagtgaagaggagatgtgtgagctctttgctgacattccagaagcgttagagaacagt
gttgaaattgctaagcgctgtaacgtgacagtgcgcctcggtgagtattttctacccgcc
ttcccaacggaaggtatggaagagaccgactttttggtcaagaagtcgcaagaaggtctt
gaagagcgcttagagttcctatttcctgaccccgaagttcgcgccgagcgccgcccagaa
tatgatgagcgtttggatatcgagcttcaagttatcaaccagatgggattccctggttac
ttcttgattgtaatggagttcatccagtggtcaaaagataacgatattccggttggtccg
gggcgtggttctggtgcaggctctttggtggcttacgcactcaaaatcaccgaccttgac
ccacttgaatacgatctgcttttcgaacgcttcttgaacccagaacgtgtttcgatgccc
gatttcgatgtcgacttctgtatggataagcgtgaccaagttatcgatcacgtggcagaa
atgtacggccgtgatgcggtgtcgcagatcattacctttggtacgatggccgccaaagcg
gtaattcgcgatgtaggtcgtgtactcggccacccgttcgggtttgttgaccgtatttca
aagttgattccgcctgatcctggtatgacgctagagaaggcatttaaagcggaacccgcg
ctaccagaactgtatgaacgcgatgaggaagtgaaagatctcatcgatatgtgtcgcatc
cttgaagggtgtacacgtaatgccggtaaacacgcaggtggtgttgttatttcaccaacc
acgattaccgattttgcccctatttatgccgattcagaagggcatttcccggttacgcag
tttgacaaaaacgacgttgaaaccgcaggcttagttaagtttgacttcttgggtctgcga
accctaaccatcattgactgggcgcttgggttgattaacccgcgtctggaaaaagagggt
ctagcccccgttcgaattgaatcgattcctttggaagatgagacttcgttcaatctattg
caaaactcagagacgacggcggtattccagcttgaatcgcgcggcatgaaagagctgatt
aagcgtctgcagccggactgttttgaagatattatcgctctggtagcgcttttccgtccg
ggcccactccaatcgggcatggtagataactttatcgaccgtaagcatggtcgagaggcg
atctcctacccagacgaaaagtggcaacatgagtcgctaaaggagattctagatccaacc
tacggtattatcctctatcaggagcaggtaatgcagatcgcccaggtcttgtcgggttat
acccttggcggagcggatatgctgcgtcgtgcgatgggtaagaaaaagcctgaagagatg
gccaagcagcgagccacctttgaagaaggggcggttgaaaatggtgtcgatggcgagttg
gcaatgaagatcttcgacttggtagagaagttcgcaggttacggctttaacaaatcgcac
tcagccgcttacgcactggtctcataccaaacattgtggctaaaaacccactatccagca
gagttcatggcggcggtaatgacggccgatatggataacactgagaaagtagttggcctg
gtggatgagtgcttgcgaatgaagcttaaagtgctgccgcccgatatcaatgcaggcttg
tatcgatttaatgtcgatgaaaagggcgcaattgtctatggcattggtgccatcaaaggg
gtcggtgaaggccctatcgacgcaattttagaggcgcgagaaaaggacggctacttcaaa
gacctgtttgatttctgtgcccgtatcgacctgaaaaaggtcaataagcgagtgattgaa
aagctgatttatgcgggtgcgcttgaccgtcttgggccacaccgagcggcgttaatggcg
tctcttgacgatgccgtgaaggcggctgcgcagcatcaccaggcagaagcgtttggtcaa
agtgacatgtttggtgtgttaacggatgcgccagaagaagtcgaacataaatatattcag
gtgccgccatggccagaaaaagtgtggttagagggcgagcgtgatacgcttggactatat
ctaactggccacccggtcaatgagtatctcaaagagctcgataaatacaccagctgtcgt
ctaaaagatgcgacgccgactcgccgtgaccagacggtcactttatcgggtttggtgatt
gccgcgcgcgttatgacgacgaaacggggcactcgcatcggtattatgacattggatgat
cgcagtgcacgtattgaagtgatgttgttctccgatgcgctggaaaaatacgcagatttg
ctggaaaaagataaaattttggtggtttcgggacaggtcagctttgatgacttcaatggc
ggccttaaaatgtccgcgcgcgaagttatggatttaggctctgcacgcgagaagtttgca
cgcgggttatctatctccatcaatgaatctcaaataaatgaaacgttttttgagcgcttt
agtcagatattagaaccacatagagccggcagtgtgccagtgcatgtatactatcaaagg
tcagatgcacgaacccgtattaccatggggactcagtggcgcgtgacgccaagcgataaa
ttactagacgaattaaaacagctactgggcaaacgccaggtagaactcgaatttcactaa
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