Vibrio astriarenae: GT360_12090
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Entry
GT360_12090 CDS
T06574
Name
(GenBank) TetR family transcriptional regulator
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vas
Vibrio astriarenae
Pathway
vas02020
Two-component system
vas02024
Quorum sensing
vas05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GT360_12090
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT360_12090
05111 Biofilm formation - Vibrio cholerae
GT360_12090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vas03000
]
GT360_12090
Transcription factors [BR:
vas03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
GT360_12090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
LacI
HTH_7
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
QIA64212
UniProt:
A0A7Z2T4L3
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All DBs
Position
1:2606702..2607355
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AA seq
217 aa
AA seq
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MDSPTQKQDVGLTDKPKSRPRTRLSPQKRREQLMEIAMEVFACRGIGRGGHADIAEIANV
SVATVFNYFPTREDLVDDVLQFVERKYSNFLSDSIDLDRHARENLKCITGAIIKMVQEDC
SWMKVWFEWSASTRSDVWPLFLSSNQTNLKLLQHMFKVAMERDEICDEHDPSHIASLFHG
ILYSLFIQGNRIEEAGELNTLADSYLNMLCIYKHEQQ
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggactcacctactcaaaaacaagatgtaggcttaacggacaaacctaaatctagacct
agaactcgcttatcgccacaaaaacgtcgtgagcagttaatggaaattgcaatggaagta
tttgcctgtcgtggcatcgggcgtggtggtcatgctgacatagcagagatcgctaacgtt
tctgttgcgactgtattcaactacttccctactcgagaagacctagtcgatgacgtactg
caatttgtcgaacgaaaatactctaattttctatccgacagtatcgacctcgacaggcac
gctagagaaaacctcaagtgcattactggcgctattattaaaatggtgcaggaagactgt
agctggatgaaagtctggtttgaatggagtgcatctacacgtagtgatgtgtggccactg
ttcttatccagcaatcaaaccaatctaaaactattgcagcacatgttcaaagtggcgatg
gagcgtgatgagatctgtgatgagcatgaccctagccacatcgcttccctcttccacggc
atcctatactcactcttcattcaaggtaatcggattgaagaggcgggagaactcaataca
cttgcagacagttatttaaatatgctctgtatttacaagcatgagcagcaataa
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