Vibrio astriarenae: GT360_12115
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Entry
GT360_12115 CDS
T06574
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vas
Vibrio astriarenae
Pathway
vas03410
Base excision repair
vas03430
Mismatch repair
vas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GT360_12115 (recJ)
03430 Mismatch repair
GT360_12115 (recJ)
03440 Homologous recombination
GT360_12115 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_12115 (recJ)
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GT360_12115 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GT360_12115 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GT360_12115 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QIA64217
UniProt:
A0A7Z2YEA2
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All DBs
Position
1:complement(2614917..2616662)
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AA seq
581 aa
AA seq
DB search
MIEIQRRPEVDISRLPESLDPLLRQLYLSRGVTSEQQLIKTAKGLHSYRQLHGIDRAVEL
LFEAIRDNKRIIVVGDFDADGATSSALSVLALRMLGSSNVDYLVPNRFEDGYGLSPEVVD
QVIDLNADVIMTVDNGVSSIEGVRYAKEKGLQVLVTDHHLPGHVLPNVDAMVNPNLEECA
FPSKALAGVGVAFYLMMALCVHMRQQGWFAAQGVAEPKLMELIDLVALGTVADVVPLDDN
NRILVHQGLQRIRAGLARPGIKALIEVAKRDESRLVATDFGFALGPRINAAGRLDDMSFG
VELLMCNNMQSARRMASELDSLNQTRKEIESGMKQEAMAFCERLQFGEDSELPYGLVLFQ
RDWHQGVIGILASRIKEQFHRPVIAFADGGEGTIKGSCRSIPGLHMRDTLDRIDTQNPGL
ILKFGGHAMAAGLTIEEKDFDQFARLFDEAVKQDLDEAALKGILLSDGELQPEQFSMHVA
ELIRSGGPWGQAFPEPMFDGEFKVLHQKLVGEKHLKLMVEPLFKGHPSNVMLDAIAFNID
LRRWPDASVRKVRLAYRLDINEFRGNSSLQLMVEYLEPLSP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattcagcgtcgaccagaagtcgatatttcgcgcttgcctgaaagccttgat
cctttattgcgtcagctttatttgtctcgtggcgtcacgtctgagcagcagctcatcaag
acagccaaaggtctgcactcttatcgtcaactgcatggtattgatcgtgcggttgagctg
ctgtttgaggccattcgcgacaacaaacgcattattgtcgtcggcgatttcgatgctgat
ggtgcaaccagttcggcactctcagtgcttgctttgcgaatgctcggctcgagtaacgtg
gattacttggtgccaaaccggtttgaagacggctatggtttgagccccgaagtcgttgat
caggtcattgacctgaacgctgatgtcattatgacggtagacaacggtgtgtcgtccatc
gagggtgttcgctacgcaaaagagaagggactccaagtgttggtgaccgatcatcacttg
ccgggtcatgtgcttcccaatgttgatgccatggtcaaccccaacctagaagaatgcgct
ttcccatcgaaagcgctggccggcgttggtgttgccttttacttgatgatggcgctgtgt
gtgcatatgcgccagcaaggatggtttgccgcgcaaggtgttgcagagccaaaactaatg
gagctgatcgacttggttgcgcttggtaccgtagcggatgtggtgccgttggatgacaac
aaccgaatcttggtgcatcaaggcttacaacgtattcgagcaggtcttgcaagacccggt
atcaaagctttgatagaagtggcaaagcgtgatgagtctcgcttggtggcgaccgatttc
ggttttgcacttgggccgcgtatcaatgctgccgggcgattggatgatatgtcgtttggg
gttgagctgctgatgtgcaataacatgcaatcagcgcgtcgaatggcgagtgagttggat
agcctcaatcaaacccgcaaagagatcgaatcaggcatgaagcaagaggcgatggctttt
tgtgaacggctgcaatttggtgaagacagtgagttgccctacggtttggttctattccag
cgcgattggcaccaaggggtcattggtattctcgcttcacgtatcaaagaacagttccat
cgcccagtgattgcttttgctgatgggggggagggcacgataaaaggatcttgccgttcc
attcccggtctgcacatgcgtgatacgcttgatcgaatcgatactcaaaaccctggtctt
atcctcaagtttggtgggcatgcaatggctgccggattaacgattgaagagaaagatttt
gaccagtttgctcggttgtttgatgaggcagtgaagcaagatttggatgaggcggctcta
aagggcattctactctctgatggcgaacttcaacctgagcagttctcaatgcatgttgca
gaactgattcgctctggtggcccttggggccaagcgttccccgagccgatgtttgatggt
gagtttaaagtgctgcatcaaaaacttgtcggtgaaaagcacttgaagttgatggttgaa
cctttgttcaaaggccacccatccaatgtcatgctcgatgctatcgcctttaacatcgat
ttgcgtcgttggccggatgcttcagtgaggaaagttaggctggcgtatcgtctcgatatc
aacgagtttcgcggtaattcctcgctacaactcatggttgagtatctagagcctctatcc
ccttag
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