Vibrio astriarenae: GT360_14500
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Entry
GT360_14500 CDS
T06574
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vas
Vibrio astriarenae
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vas03032
]
GT360_14500 (gyrB)
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_14500 (gyrB)
Enzymes [BR:
vas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GT360_14500 (gyrB)
DNA replication proteins [BR:
vas03032
]
Prokaryotic type
DNA Topoisomerases
GT360_14500 (gyrB)
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GT360_14500 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QIA64623
UniProt:
A0A7Z2YEN1
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Position
1:complement(3115748..3118165)
Genome browser
AA seq
805 aa
AA seq
DB search
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCKDII
VTIHEDNSVSVRDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSKQVTLTIHRGGHVHTQTYHHGEPQAPLAVVGDTDKTGTEIRFWPSEETFSNTE
FHYDILAKRLRELSFLNSGVSIKLRDEREDDKGDHFMYEGGIQAFVEHLNTNKTPIIEKV
FHFNAEREDGIAVEVAMQWNDGYQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNSFMDK
EGFSKKAKTATSGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSE
FLIEHPAEAKTVCTKIIDAARARDAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKK
GKQEQYIKDEDAMSQYQVSLALDNAALHVNAEAPALAGEALESLVKQYNKGMKLVERMSR
RYPQPLVHELVYTPRLTAEQCHDAAVVEAWTKTLVEQLNAKEVGASQYSFEIEQHAELGL
NLPKIVVRTHGVVHEHVLSVDFINSKEYGKLADLSEALDGLIEEGAYVKRGERTLAVSSF
VDALNWLIKESRRGLSLQRYKGLGEMNPDQLWETTMDPDTRRMMQVTIEDAVGADQLFTT
LMGDQVEPRRNFIEENALKVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaattacgattcatcgagtattaaagtactgaagggtctggatgcggtacgt
aagcgtccaggtatgtacatcggcgacacagacgacggtacaggtctgcaccacatggta
tttgaggtggtggataactcaattgatgaagcgttggcaggtcactgtaaagacatcatt
gtgactattcatgaggacaactcggtatcagttcgcgatgacggtcgtggtatcccgacg
gaaatgcacccagaagaaaaggtctctgcggcagaagttatcatgacggtacttcacgct
ggtggtaagttcgatgacaactcatacaaggtctcgggcggtctgcacggtgtaggtgtt
tcggtagtaaacgcactgtctaagcaagtaacgttaacaattcaccgcggtggccatgtt
catactcaaacctatcaccacggtgagcctcaagcgccactagcggttgtgggtgataca
gataaaacaggtactgaaatccgtttctggccaagtgaagagacattctcaaacacggaa
ttccattacgatatcctagctaagcgtctacgtgagctttctttcctaaactctggcgta
tcgatcaagctacgtgatgagcgtgaagatgataaaggcgaccacttcatgtatgaaggt
ggtatccaagcgttcgtagagcacttgaacaccaacaagacgccaattatcgaaaaagta
ttccacttcaacgcagagcgtgaagatggcattgctgtagaagtggcaatgcagtggaac
gatggctaccaagaaaacatctactgttttaccaacaacatccctcagcgtgatggtggt
actcaccttgctggtttccgagcggccctaactcgtaccctgaactcgttcatggacaaa
gaaggtttctcgaagaaagcgaaaacagccacatcaggtgacgatgcgcgtgaaggtcta
acggctgttatctcggttaaagtgccagatcctaagttctcaagccagacgaaagataag
ctcgtttcttctgaggtgaaatcagcggttgaatctgcaatgggtgagaagctatctgag
ttcttgattgagcaccctgcagaagcgaaaacagtgtgtactaagatcatcgatgcagcg
cgtgcacgtgatgcagcgcgtaaagcacgtgagatgactcgtcgtaaaggcgcactcgac
cttgcgggtcttccaggcaaacttgctgactgtcaggaaaaagatccagcactgtctgaa
ctctacatagtggagggtgactcggcaggcggctccgcaaaacaaggccgtaaccgtaag
aatcaagcgattcttcctctgaaaggtaaaatcctaaacgttgagaaggcgcgtttcgac
aagatgctgtcttcacaagaagttgcaacgctaatcacagcactgggctgtggtatcggt
cgtgacgaatacaacccagacaaactgcgttaccacaacatcatcatcatgaccgatgcc
gatgtcgatggttcgcacatccgtacgcttcttctgacgttcttctaccgtcaaatgcca
gagcttattgagcgtggctacgtgtacattgctcagccaccactctacaaagtgaagaag
ggcaaacaagagcagtacatcaaagatgaagatgcaatgagccaataccaggtttcactg
gcactggataacgcagcactgcatgtcaatgctgaggctccagcactcgctggtgaagct
ctagagtctttggttaagcagtacaacaaaggtatgaagctggtggagcgcatgagtcgt
cgctacccacaaccactcgtgcatgagcttgtttacacgccgcgtctaacggcagagcag
tgtcatgatgccgctgttgttgaagcttggactaagacactcgtagagcagctaaacgcg
aaagaagtgggtgcaagccagtacagcttcgagatcgaacagcatgcagagctgggttta
aacctaccgaaaattgttgtgcgtacacacggtgtggttcatgagcatgtgctttctgtt
gatttcatcaattcgaaagagtacggcaagctagctgacctttctgaggctcttgatggt
cttatcgaagaaggggcttacgtgaagcgtggtgagcgcacacttgctgtgagcagcttt
gttgatgctctgaactggttgattaaagagtcacgtcgtggtctaagcctacagcgctac
aaaggtctaggtgagatgaacccagatcagctatgggaaaccaccatggacccagacact
cgccgtatgatgcaagtaacgattgaagatgcggttggcgctgaccagttgtttaccacg
ttaatgggtgaccaagttgagcctcgtcgtaacttcatcgaagagaacgctctgaaagta
gcaaacctagacgtatag
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