Vibrio astriarenae: GT360_19650
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Entry
GT360_19650 CDS
T06574
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vas
Vibrio astriarenae
Pathway
vas03030
DNA replication
vas03430
Mismatch repair
vas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT360_19650
03430 Mismatch repair
GT360_19650
03440 Homologous recombination
GT360_19650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vas03032
]
GT360_19650
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_19650
Enzymes [BR:
vas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT360_19650
DNA replication proteins [BR:
vas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GT360_19650
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GT360_19650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CAF1
RNase_H_2
DEDDh_C
CRISPR-assoc_prot_CsaX
Motif
Other DBs
NCBI-ProteinID:
QIA65737
UniProt:
A0A7Z2T7Q4
LinkDB
All DBs
Position
2:1181159..1181875
Genome browser
AA seq
238 aa
AA seq
DB search
MKSILRYFHPLEQLRRKREAFLDAGHIPATFMDNIKASIPQVEDLIKDQPFIILDFETTG
LDSEEDLILSMGWVEMHNNKIDLATSQHLYINSDSQIKPETAIINHITPQMLSAGVSIHD
AMMSFFDAAVGKIVVAHGCVVEESFMNHYLAAQYKISEFPLMWLDTMHLEKALAKAINQD
SDLDVTLSGARARYGLPEYQTHNALADAVSTAELLLAIVKRIQPDNSLNVGTLYKMSH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgatattgcgttactttcatccacttgaacaactaagacggaaaagagaagcg
ttcttagatgctggacatatacccgcaacgttcatggacaacattaaagcctcgattcct
caagttgaagacttaattaaagatcaaccgttcatcatattagattttgaaacgacaggc
cttgatagtgaggaggacctcattctatcaatgggttgggtagagatgcacaacaacaag
atcgatcttgctactagccagcacttgtatatcaacagtgactcacagatcaaacctgaa
acggcgatcattaatcacatcacaccacaaatgctgtctgcaggtgtctccattcacgat
gcgatgatgagcttttttgacgcggcagttggcaaaattgtcgtcgcccacggttgtgtc
gttgaagaaagctttatgaatcattatctcgctgcccaatataagattagcgagttccca
ttgatgtggctagacactatgcatttggaaaaagcactggctaaagccattaatcaggac
tctgacttagacgtaacgttatcgggggcacgagcacgttacggcttaccagagtatcaa
acgcataatgctctggccgatgctgtttctaccgcagagctactgttggcgatcgtaaaa
cgtatccaaccagacaactctttaaacgttgggacactttataaaatgagtcactaa
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