Vibrio astriarenae: GT360_19915
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Entry
GT360_19915 CDS
T06574
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vas
Vibrio astriarenae
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vas03400
]
GT360_19915
DNA repair and recombination proteins [BR:
vas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GT360_19915
Archaeal homologous recombinant proteins
GT360_19915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
SMC_N
ABC_tran
AAA_21
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QIA65787
UniProt:
A0A7Z2T7N9
LinkDB
All DBs
Position
2:complement(1240126..1243164)
Genome browser
AA seq
1012 aa
AA seq
DB search
MKPIKLTFQAFGPFADKQEVDFDKLGHAPLFLINGPTGAGKSTLLDAICFALYGETTGSE
RTGDQMRCDQADAKQLTFVDFTFSLGGHVYRIERSPEQQVPKQRGEGTTKKTHSAVFYQL
EGETESLIANRPNPVAKEVVERIGLDVKQFRQVMVIPQGRFRELLTANSKEREQIFGQLF
STHIYRDIERVLFEQAADIRKQKDQFDNQIKGVLELAEVETEADLASVIEQKESQVTEAA
KRLESAKLAQNVVTQKWQQANELVDKFKALEALRHEQQQLGAQQQDVDNKRTQLKRARLA
TALSATYQAKNTSQQTLTHSVERCAQAEQALNTAAQEQSRCLTQLQQAKRESELLPELDK
RVYQLQAQIERLKQYQTLHTTWMAADKTLTTVEQITQALMNQQLLAQDALKQAQLNQDRA
KQAHLELPLKEQTEKAIAKQLSVLQEVETTCRASEQGQQLLASANEQLSQHQARFNQAKT
FADQQEFQWHSTQAAQLAQLLNEGEACPVCGSESHPAPAMHQGHLVSKTDVDHARVAQQQ
AFSQVEQQQAQVQNHKVEQGKIEKALEGWRRLLNEALSYDPQSLLQEQAQLRAEIKALRA
FNVDEANQQFMKVEKQLTELEGQVKQQESQRQQAQQEKSNLDGQLASLKESLGEANDLAH
TRQSLKQTTQRIQVLKQGLESAQQQQTTAEQKFTIATTTLSAETKAKQEAEIAASKQKQQ
WREELDNSDFENEDTFLHANLSRDLVEQIEQHIESFDKACAKTAGALQQIDSELKDVAQP
DLSLMTQEREQANLVYQQALAEHTQIQSVVANLNKVKVRLAELYLENEKLDKAYQVFGTL
SDVANGKTGSKVSLHRFVLGVLLDDVLIQATQRLRLMSKGRYELLRKEQRAKGNVGSGLD
LLVEDAYSGKTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLMELQQTGRTIGIISHVSELKEQMNLRIDVTPSRTGSQLSISQ
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccataaaactgacgtttcaggcgtttggcccgtttgccgacaagcaagaggtt
gactttgataagttgggacatgctcctctgtttttgataaacggcccaacgggcgcaggt
aaaagcacgctgttggatgcgatctgtttcgcgctttatggtgagaccaccggcagtgag
cgtacaggcgaccagatgcgctgtgaccaagctgatgccaagcaactgacctttgtcgat
tttactttttctttgggtggtcatgtttatcgtattgaacgcagcccagagcagcaggtg
cctaagcaacgtggtgaaggtacaacgaaaaaaacacatagtgcagttttttaccaacta
gaaggcgaaacagagtcgctgatagctaatcgtcctaatcctgtagcgaaagaggtcgtt
gagcgtatcggccttgatgttaagcagtttcgacaagtgatggtgattccacagggtcga
ttcagagagttactcaccgccaattcaaaagagcgtgaacagatctttggccagttattt
tcaacacacatctatcgagatattgaacgtgttctgtttgaacaagccgctgatatcagg
aaacagaaagatcagttcgataaccaaatcaaaggcgttctagagctggcagaagtggag
acggaagctgacttggcttcggtaattgagcaaaaagagtctcaagtcactgaagcagca
aaaaggcttgagagtgctaagctggcccagaatgttgtgacgcaaaaatggcagcaagcc
aatgagctagtcgataagttcaaagcgcttgaggcacttagacatgaacaacagcagctt
ggtgcgcagcaacaagacgttgacaataaacgaactcagttgaagcgagcacgacttgct
accgctctgtctgccacttatcaagccaagaataccagtcaacaaacgctgactcactct
gttgagaggtgcgcgcaagcagagcaagcactgaataccgcagctcaagaacagtcgcgc
tgcttaacacaacttcagcaagcgaagcgggaatcggagctgcttcctgagttggacaaa
cgtgtctatcaattgcaggcacaaattgagcggctcaagcagtatcaaactctccacacc
acctggatggcagcggataaaactctgacaacggttgaacaaataacgcaagcgctgatg
aatcaacagttgctggctcaggatgcgttaaagcaagcgcaactcaatcaagacagggca
aagcaagctcatcttgagttgcctctaaaagagcaaacagagaaggcgattgccaagcag
ttaagtgtgttgcaagaggtagaaacaacgtgtagagcgagtgagcaaggacagcagtta
ctcgcgagtgccaatgagcaactaagtcaacatcaagcgcggtttaatcaagcgaagacc
tttgccgaccaacaggaatttcaatggcacagtacgcaagcagcacagttggctcagttg
ttaaatgagggggaggcgtgcccggtatgcggtagtgagtcacatccagcgccagcaatg
catcaaggtcatcttgtcagtaaaaccgatgttgaccatgcccgcgttgctcagcaacaa
gcatttagccaagtagagcagcagcaagctcaggttcagaaccacaaggttgagcagggc
aaaatagagaaagccttagaggggtggcgtcgattactgaacgaagctctaagctatgat
ccgcagagtttgcttcaggaacaagcccagcttcgtgcagagataaaggcactacgtgct
ttcaatgtagacgaagcgaatcaacaattcatgaaggttgaaaagcagttgaccgaactt
gagggacaagtaaaacagcaagagagccagaggcaacaagcccagcaggaaaaaagcaat
cttgatggtcaactggcttcgctgaaagaaagtctaggagaggcgaatgatttggcccac
actcgccaatctctaaagcaaaccactcagcgtatccaagttctcaaacaaggtttagag
tctgcgcaacaacagcaaaccacggcagagcagaagttcaccatagccaccaccacattg
agcgcagaaacgaaagccaagcaagaagcagagattgctgccagtaagcagaagcagcag
tggcgagaggagttagataatagcgactttgagaatgaagacacattcttacacgccaac
ttaagccgcgatctcgttgaacagattgaacagcacatcgaatcgtttgacaaagcctgc
gctaaaaccgcaggtgcattacagcagatagactcagagttgaaagatgttgctcagcca
gatctgtctttaatgactcaagagagagagcaagcaaacctggtctaccagcaagcgtta
gcggagcatactcaaatccagagtgttgtggctaatcttaataaggtcaaagtacggttg
gctgagctgtatcttgagaacgaaaagctcgataaagcttatcaagtgtttggcacttta
agcgatgtggcgaatggtaagacgggctctaaagtcagtctgcaccgttttgtgcttggc
gtgttgttggatgatgttttgattcaagcaacccaacgtttgcgcttgatgagtaagggg
cgttacgagctattacgtaaagagcagcgcgcaaaaggcaatgtaggctcagggctcgat
cttctggttgaagatgcctacagcggtaaaacccgagatgtagccaccctctctggcggt
gagtcgtttatggcagcccttgctctagcgttaggcttatccgatgtcgttcagtcttac
agtggaggtattcgtttggatacactcttcatagacgaagggtttggtagtttggaccca
gaatcactggatcttgccattcaaaccttgatggagttgcaacaaactgggcgcacaatc
ggtatcatctcacacgtctcagagctcaaagagcagatgaatttgagaattgatgtgaca
ccatcaagaacgggaagccagctgtcgattagtcaataa
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