Vibrio astriarenae: GT360_21145
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Entry
GT360_21145 CDS
T06574
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vas
Vibrio astriarenae
Brite
KEGG Orthology (KO) [BR:
vas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vas03016
]
GT360_21145 (rnb)
Enzymes [BR:
vas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GT360_21145 (rnb)
Transfer RNA biogenesis [BR:
vas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GT360_21145 (rnb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QIA66003
UniProt:
A0A7Z2YG04
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Position
2:complement(1544931..1546925)
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AA seq
664 aa
AA seq
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MFQDNPLLAQLKQQIQETLPKKEGTIKATDRGFGFLEVDNKTSFFIPPPYMKKCMHGDRV
SAIIRTEKEKEVAEPQELLEQGIERFIGRVKLFKGKLNVVPDHPQLKKLSLKAKTRKGLK
QDEFAEGDWVVAHLIRHPLKGDNDFFVEISEKITDANDKIAPWWVTLAQNDLPKTEPAGI
EHWEIKDDADLERIDMTAVPFVTIDGESTKDMDDALYAKKTANGDFELTIAIADPTAYIT
PDDEMDKVARERGYTIYLPGRNIPMLPRDLADELCSLIEGELRPALCCSVTVSKDGVIGE
DIQFFAANIQSHARLAYDHVSDWLETGSSDKWSPSEEIAQVVRDLYDFSLARADWREKNA
VVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEEAMITANICAGKTLQNHFNAGVFNT
HAGIKTEKLEDVVKLVNPEQALPFTVESIATLEGFAELRRWLAGQETSYLDNRIRKMQAY
SEVGNAPLPHYAMGLDVYATWTSPIRKYGDMINHRMLKAHILNKEPVQRPDETVGEELAL
HRKHHNIAERTVGDWLYARTLTEEPTKQTVFTAEIFDINRAGMRVRLLENGAGAFIPGSV
VMDNKERLACDSEQGLLSIDKEVVYRLGDQLKVTLIEVNQENRSLVAKPAEVFADKPAPE
ATAS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaacccattactggcccagctcaagcagcagattcaagaaacacttcca
aaaaaggaaggcacgattaaagcgaccgaccgtggctttggcttcctagaagtggacaac
aaaaccagcttcttcattccgccaccatacatgaaaaaatgtatgcatggtgacagagtg
agtgcgatcatccgcactgaaaaagagaaagaagtggccgagccacaggagttgctggaa
caaggtatcgaacgtttcatcggtcgcgtaaaactgttcaaaggtaagctcaacgttgtg
ccagatcacccacaactgaaaaagctgtcactgaaggccaaaactcgtaaaggtcttaaa
caagatgagtttgccgagggcgactgggttgttgcgcacttgattcgtcacccactcaag
ggcgacaacgatttctttgttgagatctcagaaaaaatcactgatgccaatgacaaaatt
gcgccatggtgggtaacactggcacaaaacgatcttccaaagactgagcctgcgggcatt
gaacattgggaaatcaaagacgatgcggatcttgagcgcatcgatatgacagcagtgcct
ttcgtgactatcgacggcgaatcaaccaaagatatggacgatgccctgtacgcgaagaaa
actgccaacggtgactttgaactcacgattgcaattgcagatccaaccgcttacatcacg
ccagatgacgagatggataaggtagcacgcgagcgcggctataccatctacctaccaggc
cgcaacatccctatgttgccacgcgacctcgctgatgagctttgctctttgattgaaggt
gaacttcgtccagcgctttgctgtagcgtgactgtatcgaaagacggtgtgattggcgaa
gatatccagttcttcgctgcgaacattcaatcgcatgctcgtttggcctatgaccacgtt
tctgattggctagaaacaggctcaagtgataaatggtcaccaagcgaagagattgcacag
gttgtacgtgacctttatgacttttcacttgcacgtgctgattggcgtgagaaaaatgcg
gttgttttccccgaccgtccagactaccgctttgaacttagcgaagataatgatgttgtg
gctattcatgccgacatgcgccgcagcgcaaatcgtctcgttgaagaagcgatgatcact
gcgaatatctgtgctggtaagacgctgcaaaaccactttaacgctggcgtattcaacact
catgctggcatcaaaactgaaaagcttgaagatgtggttaagctcgttaacccagaacaa
gccctgccatttaccgtagagtctattgccacgctagagggctttgcagaacttcgtcgc
tggttagcaggacaagagacttcgtacttagataaccgtatccgcaagatgcaagcgtac
agcgaagtgggcaacgcgccgcttcctcactatgcgatgggtcttgatgtctatgcgact
tggacatcgccgattcgtaaatatggcgacatgattaaccaccgcatgttgaaagcgcat
atcctcaacaaagagccagtgcagcgccctgatgaaaccgtaggtgaagagctagcacta
caccgcaagcatcacaatattgcagaacgcacggtgggtgattggctctatgctcgtaca
ctcactgaagagccaaccaagcaaacggtattcacagcggagatcttcgatatcaatcgc
gcaggcatgcgagtgcgtctccttgaaaacggcgcaggtgcctttattcctggctccgtt
gtcatggataacaaagaacgtttggcttgtgacagtgagcaagggctactgtctatcgac
aaagaggtggtataccgccttggtgaccagcttaaagtgactctgattgaagtgaatcaa
gagaatcgtagcttggtggcaaaacctgctgaagtatttgctgacaagccagcaccagaa
gcaactgcttcatag
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