Veillonella atypica: B7L28_03415
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Entry
B7L28_03415 CDS
T04798
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vat
Veillonella atypica
Pathway
vat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7L28_03415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vat03400
]
B7L28_03415
DNA repair and recombination proteins [BR:
vat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7L28_03415
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B7L28_03415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_5
AAA_22
UB2H
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ARF99061
LinkDB
All DBs
Position
774491..776662
Genome browser
AA seq
723 aa
AA seq
DB search
MKHNSYNYEGGQPFKVEAPFTPTGDQPTAIQSLTDGIERGEWAQVLLGATGTGKTFTMAK
VIEAVQKPTLIIAHNKTLAAQLCSEFKSFFPNNAVEYFVSYYDFYQPEAYIPSSDTYIEK
DASINDEIDKLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSDLVLSLRLGQTKSRDE
ILSKLVDIQYTRNDMNFIRGTFRVQGDTIEIFPAAYSERAIRVELFGDEIDRLVEVDALT
GEVIAERKHVAVYPASHYVTTKEKMKIAVERIEAELDEQLAKLKAEDRLLEAQRLEQRTR
YDIEMMQEMGYCSGIENYSRHMSERKAGEAPYTLIDYFPDDFLIMVDESHVTIPQIRAMY
NGDRARKESLIEYGFRLPSALDNRPLKFDEFVERINQIVYVSATPGPYEMEVETNVAEQI
IRPTGLLDPSIEIRPIKGQMDDLLGEIHKRAAMNERVLVTTLTKKMAEDLTEFLKEMGVR
VRYLHSDIVTIERAEIIRDLRAGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSD
TAMIQTIGRAARNVNGHVIMYADRVTGSMQRAIDETDRRRAVQEAYNIEHNITPKSVSKD
VKELIELTKIEEDMVTDGEDFSPKKGKKKSSTAGMDHGHEPYAQDAAATKVADITAEELY
NKIEELDRQMKAAAKQLEFEKAAKLRDQLGELRQQWSDMHSAGESKLKKPRKNSKKQSPK
SKK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataatagctataactatgaagggggccaaccatttaaagtggaggcgcccttt
acgcctactggggaccaacctacagccattcaatctcttacagacgggattgagcgtggc
gaatgggctcaagtcctattaggtgcgactggtacaggaaaaacctttaccatggcaaag
gtcatcgaggcggttcagaaaccgaccttgattatcgcccataataaaacattggctgct
caactttgcagcgagtttaaaagtttcttccctaataatgcggtagaatactttgtatct
tactacgatttttatcaaccagaagcgtatatcccttctagcgatacgtacatcgagaag
gatgcatctattaatgatgaaatcgataaattgcgccatagtgctactatgagtttattt
gagcgccgagacgttatcatcgttgcttctgttagctgtatttatggcttaggtgatccg
gaggactattctgatctcgtattgtccttgcgattaggtcagacgaaatctcgtgatgaa
attctgtctaaactcgtagatatccaatatacgcgtaatgatatgaattttattcgcggt
acatttcgcgtacaaggggacaccatagaaattttccctgctgcctatagtgaaagagca
attcgggtggaactattcggcgatgaaatcgatcgtcttgttgaggtggatgcattaacg
ggagaagtcattgcagagcgcaaacatgttgcggtctatcctgcatctcactatgttaca
acaaaagaaaaaatgaaaattgcggtagagcgcattgaggcagaacttgatgagcagttg
gcaaaactgaaagcagaagatcgtctgctcgaggcgcaacgtcttgaacagcgcacccgt
tatgatatagaaatgatgcaagaaatgggctattgctcaggcatcgaaaactattcccgt
catatgtcggagcgtaaagcaggggaagcaccatatacattgatagactacttcccggat
gatttcctcattatggtagatgaatcgcatgtaacgattcctcagattcgtgctatgtac
aatggggatagagcgcgtaaagaatctcttatcgaatatggcttccgtttgccgtcagct
ctcgacaatcgaccattgaaatttgatgagtttgtagaacgaatcaatcaaatcgtgtat
gtatcagcaacgccaggaccgtatgaaatggaagtagaaacgaatgtggcagagcaaatc
attcgtcctacaggcttactcgatccatccattgaaattcgtcctattaagggccaaatg
gatgacttgcttggtgaaatccacaaacgtgccgccatgaatgaacgggttctcgttacg
acattgacgaagaagatggctgaagatttaacggaatttttgaaggaaatgggcgttcgt
gttcgttaccttcactcggatatcgttactatcgagcgggccgaaattatccgcgattta
cgggctggtgtattcgatgtattggtcggtatcaatttacttcgtgaaggcctagatatg
ccagaagtttctttagtagctattttagatgccgataaggaagggttcttacgttctgat
acggctatgattcaaacaatcggtcgcgccgcgcgtaatgtgaatggtcacgttattatg
tacgcggaccgcgtaacaggttctatgcaacgggctattgatgaaacagaccgtcgtcgt
gctgtgcaagaggcttataatattgaacataatattacgccaaaatcagtatctaaagat
gtgaaagagcttattgagctcacaaaaatcgaagaagatatggtgaccgatggagaagat
ttttcaccaaagaaagggaaaaagaaatcctctacagctggaatggaccatggccacgaa
ccatatgctcaagatgcagctgctactaaggtggcagacattacggcggaagaactatat
aacaagattgaagaattggaccgtcaaatgaaggcggctgcaaaacagttggaatttgaa
aaggctgccaaattgcgtgaccaattgggcgaacttcgtcaacaatggtcagatatgcat
agtgctggtgaaagtaagttgaagaaaccacgaaaaaattctaaaaaacaatcaccaaaa
agtaaaaaataa
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