Veillonella atypica: B7L28_04215
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Entry
B7L28_04215 CDS
T04798
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vat
Veillonella atypica
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vat03016
]
B7L28_04215
Enzymes [BR:
vat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
B7L28_04215
Transfer RNA biogenesis [BR:
vat03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
B7L28_04215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Fe_hyd_lg_C
DUF2573
Motif
Other DBs
NCBI-ProteinID:
ARF99211
LinkDB
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Position
937377..938693
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AA seq
438 aa
AA seq
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MKSYYIYTYGCQMNTADSERLSHQLETVGYIPTDDVESADLILLNTCAVRETAETKVFGR
IGELKRLKQKNKNLIIAITGCMAQKNQAEMFKRAPHIDIVLGTHNIQHINEMIAEVQRTH
KHQINVDMDNTVLPELQAKPNGKFFAWVPIMNGCNKFCTYCIVPHVRGREISRPVEAIVK
EVTELGAKGFKEITLLGQNVNSYGLDFKDGTDFGTLVDALDHIPGIERIRYMTSHPQDMT
KSMIDALGRSSNIVTHLHLPIQSGSDRILKKMNRHYTVEHYKELLSYCREKIKNVVVTTD
IIVGFPGETEEDFEQTLQLLKDVCYDMAYTFIYSKRSGTPAATMDEQVPEEVKRVRLQQL
MDIQNEISLELNKTMEGKVFDIIVEGPSAKDETMWFGRTSGNKMVLFPKDDELTIGDTVP
AYIDKAQTWVCYGTIQKG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcatattatatatatacctatggttgtcaaatgaataccgctgattctgagcgt
ctttcacatcaacttgaaacagtaggttatataccgaccgatgatgtagaatcggcagat
ttaatattattgaatacctgtgcagtacgtgaaacggcagaaacgaaagtatttggtcgt
atcggtgaattaaaacgtttaaaacaaaaaaataaaaatttgatcattgctattacaggt
tgtatggcacaaaaaaatcaagctgaaatgtttaaacgcgcacctcatatcgatattgtc
ctaggtactcataatattcaacatattaatgaaatgattgctgaggttcaacgtacccat
aagcatcaaatcaatgttgacatggataatacagtacttccagaattacaggcaaaacct
aatggtaaattttttgcttgggtaccgattatgaatggttgtaataaattttgtacttat
tgcatcgttcctcatgtgcgcggtcgtgaaattagccgtcccgtagaagcaattgtaaaa
gaagtaacagagttgggtgcaaaagggtttaaggaaattacgttgttaggacaaaatgta
aattcctatggcttagattttaaagatggtaccgattttggcacattagtagatgctctt
gatcatatcccaggcattgaacgtattcgttatatgacgagtcatcctcaagatatgacc
aaatcaatgattgatgcattggggcgctctagtaatatcgttacgcatttacatttacca
attcaatccggttctgatagaattttaaagaagatgaatcgccattatacggtggaacat
tataaagaattattatcctactgtagagagaaaattaaaaatgtggttgtaacaaccgat
ataatcgtaggttttcctggggagactgaggaagattttgaacagacgcttcaattatta
aaagatgtttgctacgatatggcttatacttttatttactctaaacggtctggtacacct
gctgctaccatggatgagcaagttccagaagaagtaaaacgcgttcgtctacaacaattg
atggatattcaaaatgaaatttctttagaactcaataaaactatggaaggcaaagtattt
gatattattgtagaaggtccaagtgctaaagatgaaaccatgtggttcggtcgtacgtcc
gggaataagatggtactattcccaaaagatgatgagttaactatcggtgatactgtacca
gcctatattgataaagcacaaacatgggtctgctacggtaccattcaaaaggggtaa
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