Veillonella atypica: B7L28_04675
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Entry
B7L28_04675 CDS
T04798
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vat
Veillonella atypica
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vat03032
]
B7L28_04675
03400 DNA repair and recombination proteins [BR:
vat03400
]
B7L28_04675
Enzymes [BR:
vat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B7L28_04675
DNA replication proteins [BR:
vat03032
]
Prokaryotic type
DNA Topoisomerases
B7L28_04675
DNA repair and recombination proteins [BR:
vat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B7L28_04675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
ARF99302
LinkDB
All DBs
Position
complement(1036401..1038719)
Genome browser
AA seq
772 aa
AA seq
DB search
MSIKRSIVIGEPKEPKQETKKKKTTINKKVSKEALTPVGIVRDKSIVATSMPPEQRKPRV
YNPDGKILVIVESPAKSKTIEKFLGPNYIVKASMGHLRDLPKSQMGIDIDHDFTPRYSNL
VARKKVIDDLVAHADESSAVLLATDPDREGEAISWHLAYILNVDITSNCRITFNEITKTA
VVEALEHPRTVDMNMVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSVAVRLICE
REREIQAFVPQEYWSIEGQFKTKTNEEFAAELTHVKGDKLDITCDADAVAIQKAIADHTA
TVTSVKKSKRSRKPAPPFTTSTLQQDGVRKLNFGAKRTMMIAQHLYEGLEIGSYGHVGLI
TYMRTDSTRISKDMQEQARGYIKRTYGDDYCPAKPNVYGKKESAQDAHEAIRPTSLELTP
KMVEPFVNRDELKLYTLIWNRFMASQMAPQQNESTTIELDIDDTYTFKATGSRVLFPGFS
AVYEDSKKEDTPQLPALKKSDVVETVLIDPEQHFTQPPARYSEASLIKTLEELGIGRPST
YAPIIDTIVSRNYVETNNKQFIPTELGFVVVDFLVDYFEKIINTGFTAELEEELDAIANG
KDTYVKVLTDFYNIFKQELDDASDVDKIQIASMESDEICELCGHPMVYKFGRYGKFLACS
NFPECKNTKPITVGTGVACPKCGEGEIVERKSKRGRIFYGCNRYPQCDFTLWDKPTHEFC
DTCGSIIVEKSYKNGTTKKFCSNETCPTRPPKKTRKKKSDDSVKKEEDTKSE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
ttgtccattaaacgatctatcgttattggggaaccgaaagaaccaaaacaagaaacaaaa
aagaaaaagactacgattaataaaaaggtatcaaaagaagcgttgacaccagttggtatt
gtacgcgacaaatcgattgttgctacatcgatgccaccagagcaacgaaaacctcgcgta
tataatccggatggtaaaatccttgtcattgtggaatcaccggctaaatctaagactatc
gagaaatttttaggccctaattatattgtgaaagccagtatgggccatcttcgagatttg
cctaaatctcaaatgggtatcgacattgatcatgactttaccccacgatatagtaatctg
gtagcacgtaaaaaggtgattgacgatttggtggcccatgccgatgaaagtagcgccgta
ttgctcgcaactgacccggaccgcgaaggggaagctatttcttggcatttagcatacatt
ctaaacgtagatatcacatctaattgtcgtattacttttaatgaaattacgaaaactgct
gttgtagaggccttagagcatccacgtactgtggatatgaacatggttgacgcacagcaa
gcacgtcgtgtactagaccgcattgtagggtataaattaagccctctattatggaaaaag
gtttgcaaaggtttgagcgctggtcgtgttcaatccgtagctgtacgtctcatttgtgaa
cgagaacgtgaaatacaagcttttgtacctcaagaatattggtctattgaaggacaattt
aagacgaaaactaatgaagagtttgccgctgaactaactcatgtaaagggcgacaaacta
gatattacatgtgatgcagatgcagtagcaatccaaaaggctattgcggaccatacggct
actgttacatctgttaagaaaagtaaacgaagccgtaaaccagctccgcctttcaccaca
tctacattgcaacaagatggtgttcgtaagcttaattttggggctaaacggaccatgatg
attgctcaacatttatatgaaggtttggaaattggttcttatggtcacgtaggtttaatt
acctatatgcgtacagactctacacgtatatccaaagatatgcaagaacaggcaagaggc
tatattaagagaacctatggcgatgactattgccctgctaaaccgaatgtatatggtaag
aaggaatcagctcaagatgcgcatgaagccattcgtcctacatctcttgaattgacacct
aaaatggtagaaccatttgtaaatcgcgatgaactaaagttatatacactgatttggaat
cgttttatggctagccaaatggcaccacaacaaaatgagtccactaccattgaactagat
attgatgatacttatacctttaaggcaactggttctcgtgtgttattccctggatttagt
gcagtctatgaagatagtaagaaagaagatacaccacaattaccagcattgaagaaatct
gatgtggtggaaactgtacttattgacccagaacaacattttacgcaaccgcctgctaga
tattctgaagcaagccttatcaaaacattggaagaattaggcattggtcgcccaagtaca
tatgcgccaattatagatactatcgttagccgtaactatgtagaaacaaataataaacaa
ttcatacctacagaacttggctttgtagtagtagactttttagtggactattttgaaaaa
atcatcaacactgggtttactgcagaacttgaagaggagctcgatgccatcgctaatggt
aaggatacatatgtgaaggtattgactgatttttacaatatatttaagcaagaattggat
gatgctagcgatgtagacaaaattcaaatcgcatccatggaaagtgatgaaatctgtgag
ctttgtggtcatcctatggtctataaattcggtcgctatggtaaattcttagcatgttct
aacttcccagaatgcaagaacactaaaccgattacggttggtaccggtgttgcttgtcct
aaatgcggtgaaggggaaatcgtagaacggaaatctaagcgtggtcgtatcttctatggt
tgtaatcgttatccacaatgcgattttacgttatgggataagcctactcatgagttctgc
gatacatgtggtagtattatcgttgaaaaatcatataaaaatggtacgacgaagaaattc
tgctccaatgaaacatgtccaactaggccacctaagaaaacgagaaagaaaaagtctgat
gattcagtaaagaaagaagaggatacaaagagtgagtga
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