Veillonella atypica: B7L28_04845
Help
Entry
B7L28_04845 CDS
T04798
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vat
Veillonella atypica
Pathway
vat03420
Nucleotide excision repair
vat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7L28_04845
03430 Mismatch repair
B7L28_04845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vat03400
]
B7L28_04845
Enzymes [BR:
vat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7L28_04845
DNA repair and recombination proteins [BR:
vat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7L28_04845
MMR (mismatch excision repair)
Other MMR factors
B7L28_04845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_14
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARF99334
LinkDB
All DBs
Position
complement(1080981..1083170)
Genome browser
AA seq
729 aa
AA seq
DB search
MQSLLDGLNREQQQAVQHTEGPLLILAGAGSGKTKVLTVRIAYLLAQGVNPYEILAITFT
NKAAKEMKSRVEGLVGDVANRIWLSTFHSFCAKFLRFELDNFLGYNSNFTIYDTSDSQVV
IKAALKALNLDDKYYPVGAMISAISDAKNKLMFASDYRKQARDFYQQKVADVYEYYEREL
RKNNALDFDDLLLVAVKLLQSNAAVLDKYSKRFKYVMIDEYQDTNHAQYLLAYLLSSHWK
NIAVVGDADQSIYAWRGADIQNILDFEKDYPNCTSIKLEQNYRSTKIILDAANAVIDNNE
GRPEKNLWTDKVEGAKIQYFTAQSEHEEAAFIGDTIVKKHDIHGVPYGDMAILYRTNAQS
RVLEEALIKRALPYTMVGGTKFYDRKEIKDVLAYLRVLYNPFDDLSLLRIINVPKRSIGA
TTVSKLQDYARENGTSLFMTLTQLHLVDTIKGKTKEKLEEFGILIFTLVAEMDDKSVLDI
LEAILDRTGYLAQLEESTDPQDQARAENIGELLSVAKDFQDTNPTGTVEDFLEQVALVND
VDSFEQEESKVTLMTLHAAKGLEFPIVFLGGLEEGLFPHSRTLMNPEEIEEERRLAYVGI
TRAEKELYISNATTRTVFGRTSSYLPSRFIDEIPAELVDSLRAKRRIPDDIKPTVPRHMS
VASRPVTKPIIRNEVIADWKVGDTAIHSKWGNGKVVNVSGEGAGMKLTIEFPTQGVRVVM
AKFAPVKKG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcattgttagatggcttgaatcgggagcaacaacaagccgtacaacataccgaa
ggcccactattgattttagcaggtgcaggatcagggaaaacaaaggtattaactgtacgt
atagcatatttactagctcaaggtgtaaatccttatgaaatcttagccatcacatttacc
aataaggcggctaaggaaatgaaaagccgtgtagaaggccttgtaggcgatgtggcgaat
cgaatttggctaagtacattccacagcttttgtgctaaatttttacgctttgaattagat
aattttttaggttataatagtaattttacaatttatgatacatctgactctcaagttgtt
ataaaggcagcgttgaaggcccttaatctggacgataaatattatcctgtaggtgctatg
atcagtgctatttctgatgcgaaaaataaattgatgttcgcctcagattatagaaaacaa
gcacgagacttttaccaacaaaaggtagctgatgtctatgaatactacgaacgggaattg
cgtaaaaataatgcattagattttgatgatctattactcgtggcggttaaactattacaa
tcgaatgcagccgtactagataaatatagcaaacggtttaagtatgtcatgattgacgaa
tatcaggatacgaaccatgctcaatatttattggcctatttgttatcatcgcactggaaa
aatatcgccgtcgtaggtgatgctgaccaaagtatttacgcttggcgtggtgcagacatt
caaaatatcctcgattttgaaaaggactatccaaattgtacatccattaaattagagcag
aattatcgttctaccaaaattatcttggatgctgccaatgcagttatcgataataatgaa
gggcgtccagaaaagaatctttggacagataaggtagaaggagctaaaattcaatatttt
acagctcaatcggaacatgaagaggctgctttcataggcgatacgattgtaaagaaacac
gatattcacggcgtaccatatggtgatatggcaatcttatatcgtaccaatgcacaatcc
cgtgtgctagaagaagcattgataaaacgtgccttaccgtacactatggtaggtggcact
aagttctacgaccgaaaagaaatcaaagacgtgctcgcttatttgcgcgtattatataat
ccgtttgatgatttaagtttattgcgtattattaatgtgccaaagcgtagtataggtgct
actacggtatctaaattgcaagattatgcccgtgaaaatggtacatctctatttatgacc
ttaacgcaattgcatttggtcgataccattaaggggaaaacgaaagagaaactggaagaa
tttggcattttaatttttacacttgttgcagaaatggatgataaatccgtccttgatatt
ttagaagccatccttgatagaactggatacttggctcaattagaggaaagtacggatcca
caagaccaagcgcgggcagaaaatatcggtgaattattatctgtagcaaaagatttccaa
gatacaaatccaacgggtactgtagaagatttcttggaacaagtagctctagtgaatgat
gttgattcctttgaacaagaggaatctaaggttaccttgatgacattacatgctgctaag
ggtcttgaattccctatcgtattcctcggtggcttagaagagggcttattcccacatagt
cgtaccttgatgaatccagaggaaatagaagaagaacgacgcctcgcgtatgtagggatt
acgcgtgctgagaaggaattatacatttctaatgctacaactcgcaccgtatttggtcgc
actagtagctatttaccatctcgtttcatcgatgaaattccggcggaactcgtcgatagt
ttacgtgcgaaacgaagaattcctgatgatattaaaccaacagtgccacgacatatgtcc
gtagcaagtcgccctgtaacaaagccgattattcgcaatgaagtgatcgctgattggaag
gttggggatactgctattcacagtaaatggggaaatggtaaggtcgtcaatgtttccggt
gaaggggctggcatgaagttgaccatcgaattccctacacaaggtgttcgcgtcgttatg
gccaagtttgcaccggtaaaaaaaggttag
DBGET
integrated database retrieval system
