Veillonella atypica: B7L28_05395
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Entry
B7L28_05395 CDS
T04798
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vat
Veillonella atypica
Pathway
vat00260
Glycine, serine and threonine metabolism
vat00460
Cyanoamino acid metabolism
vat00630
Glyoxylate and dicarboxylate metabolism
vat00670
One carbon pool by folate
vat00680
Methane metabolism
vat01100
Metabolic pathways
vat01110
Biosynthesis of secondary metabolites
vat01120
Microbial metabolism in diverse environments
vat01200
Carbon metabolism
vat01230
Biosynthesis of amino acids
vat01240
Biosynthesis of cofactors
vat04981
Folate transport and metabolism
Module
vat_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B7L28_05395
09102 Energy metabolism
00680 Methane metabolism
B7L28_05395
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B7L28_05395
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
B7L28_05395
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
B7L28_05395
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
B7L28_05395
Enzymes [BR:
vat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
B7L28_05395
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DeoC
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ARF99435
LinkDB
All DBs
Position
complement(1189884..1191125)
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AA seq
413 aa
AA seq
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MSFLAKQDPNVKAVIDQELMRQRDKLEMIASENIVSQAVMEAQGSVLTNKYAEGYPGKRY
YGGCEHVDVVETLAIERAKRLFGAEHANVQPHSGSQANFAVYFAMLKPGDTIVGMNLSHG
GHLTHGSPVNVSGTYFNVVPYGVNAETQQIDYDEFRKIVLEAKPKLIIAGGSAYSRQIDF
KKMADVAHEVGAIFMVDMAHFAGLVAAGLHPNPVEYADIVTTTTHKTLRGPRGGMILCKE
EYAKAIDKAVFPGIQGGPLMHVIAAKAVALGEALQPEFKVYAEQVIKNAKVLATELIAKG
LTIVSGGTDTHVMLVDVRNTGLTGKEAEHLLDEIGITANKNTIPFDPASPFVTSGVRLGT
PALTTRGLKEDDMKEIADIIATVLQNPEDTAKHQDAAKRVAALCEKYPLYPNL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttagcaaaacaagaccctaatgttaaagcagttatcgatcaagaattaatg
cgtcaacgcgataaattagaaatgatcgcttctgaaaatatcgtatcccaagccgttatg
gaagctcaaggtagcgtattgactaataaatacgctgaaggctaccctggcaaacgttat
tatggtggttgcgaacatgtggacgtagtagaaacattggctattgaacgcgctaaacgt
ttatttggtgcagaacatgcaaatgtacaaccacattctgggtctcaagctaactttgct
gtatattttgctatgttaaaacctggtgacactattgttggtatgaacttgtcccatggt
ggtcacttaacacatggttctcctgtaaacgtatctggcacatattttaatgttgttcct
tacggtgttaatgcagaaactcaacaaatcgactatgatgaattccgcaaaatcgtatta
gaagcaaaacctaaattgatcattgctgggggcagtgcttacagccgtcaaatcgacttc
aagaaaatggctgatgtagctcatgaagtaggcgcgattttcatggtagatatggctcac
tttgctggccttgtagctgctggtttacatccaaatccagtagaatatgcagatatcgtt
acaactacaacacataaaacattgcgtgggcctcgtggtggtatgattttgtgcaaagaa
gaatatgcaaaagctattgataaagctgtattccctggtatccaaggtggtcctttgatg
catgttatcgctgcaaaagctgttgcattaggtgaagcattacaaccagaatttaaagta
tacgctgaacaagttattaaaaatgcaaaagtattggctactgaattgatagctaaaggt
ttgactatcgtttctggtggtacagatacacatgttatgcttgtagatgtgcgcaataca
ggtttgactggtaaagaagcagaacatcttctcgatgaaatcggtatcacagctaataaa
aatacaattccattcgatccagctagtccatttgtaactagtggtgttcgtttaggtaca
cctgcattgactacacgtggtcttaaagaagacgatatgaaagaaattgcggatattatt
gctacagtacttcaaaatccagaagatacagcaaaacatcaagatgctgcaaaacgcgta
gctgcattatgtgaaaaatatcctttatatcccaacttataa
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