Veillonella atypica: B7L28_07980
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Entry
B7L28_07980 CDS
T04798
Name
(GenBank) diguanylate phosphodiesterase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vat
Veillonella atypica
Pathway
vat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B7L28_07980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vat02000
]
B7L28_07980
Transporters [BR:
vat02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
B7L28_07980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ARF99909
UniProt:
A0AAJ1V4N9
LinkDB
All DBs
Position
complement(1737298..1738854)
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AA seq
518 aa
AA seq
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MKIKKYSFLGVCVVLIAIFTVFGCGKNTDKDTLKVGAMSYAGTLEPTENYFSWGIVRYGI
GENLVKFDDSMKPQPWIAESWSVGDDHKTWTFVINDKVKFSNGRKVTAQSVKESLERTFE
KSKRAKSFFAYDSIEANGQNLIIHTDKVYPNLPGLLGDPLFLIVDVQSERDGRNFSKEGP
IATGPYVATSFTKERIELDKNENYWDGDVGFKHVIVDSIEDVNTRALALQAGDIDMAVNI
AAGEYGLFADNKDYIIEETPSLRVVMVRMNHNGYLNDINIRRALVAGADRESYAKKLFKD
TFVAGRTPLPPCLNYGFNDIKIPETYNPERAKELLAQSGWVDTDGDGYVDKDGKKLRLNF
YTYTSRPEVTLYAEALQVDYKKIGIDVNVEVVDSSVVDKVTRSGDYDLAITSVSTASTGS
PVWFLKQYWGTNIDGSNPTNVSGFSNLAYDQLLDLAETTLDDKQRYNAIVDAQQILLDDS
AALFLGYPKINMICKNYLKGLNISPSEYYIITKDLKKE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaaagtatagtttcttgggtgtttgtgtagttttgatagctatttttact
gtttttggatgtggaaagaatactgataaggatacattaaaggttggggccatgtcatat
gcgggaacattggagcctacagagaattattttagttgggggattgtgaggtatggcatc
ggtgagaatctagttaaatttgatgattctatgaagccacaaccgtggattgccgaatct
tggtccgtaggggatgatcataaaacatggacatttgtaattaatgataaagtaaaattt
tctaatgggcgtaaggtaacagcacagtctgttaaggagtctttggaacgtacatttgaa
aaaagcaaacgggcaaaatcgttttttgcttatgattccattgaagcaaatgggcagaat
ttaattattcatacagataaggtttatcccaatttaccagggctattgggcgatccttta
ttcttgattgtagatgttcaatcagagcgtgatgggcgcaactttagtaaggaaggacct
attgcaacgggaccatatgtagcaacatctttcacaaaagaacgtatagaattagataaa
aacgaaaattattgggatggagacgtagggtttaaacatgtaatagtagattccattgaa
gatgttaatactcgtgcattggcattacaagcaggagatattgatatggctgtaaatatt
gctgctggagagtatgggttatttgcagataataaggattatattattgaagaaacccca
tcattgcgcgttgtaatggttcgcatgaaccacaatggatacttgaatgatatcaatata
agacgagcactagttgctggagcagatcgtgaaagttatgcaaagaaattatttaaagat
acttttgttgctggtcgaactccattaccaccatgtttgaattatggttttaatgatatt
aaaattccagaaacttataatccagagcgggcaaaagaattgttagcccaatcaggttgg
gttgatactgatggcgatggttatgtagataaggacggtaaaaaattacgtctcaatttt
tatacttatacatctagacctgaggttactctatatgctgaagctttacaagttgattat
aagaaaataggtattgatgtaaatgtggaggttgtagactctagtgtagtggataaagta
acacgatctggcgattatgatttagcgataactagtgtatctacagctagcacaggtagc
cctgtatggttcttaaaacaatattggggaacaaacattgacgggtctaatcctacaaat
gtttctggttttagtaatctagcgtatgatcagttacttgatttagcagaaacaacttta
gatgataaacaacgatataatgctattgtagacgcacaacaaatcttattagatgatagt
gcggcattattcctaggttatcctaagattaatatgatttgtaaaaattatttgaagggg
cttaatatctcacctagtgaatactacattattactaaagatttgaaaaaagaataa
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