Veillonella atypica: B7L28_08425
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Entry
B7L28_08425 CDS
T04798
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vat
Veillonella atypica
Pathway
vat03030
DNA replication
vat03430
Mismatch repair
vat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B7L28_08425
03430 Mismatch repair
B7L28_08425
03440 Homologous recombination
B7L28_08425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vat03032
]
B7L28_08425
03400 DNA repair and recombination proteins [BR:
vat03400
]
B7L28_08425
Enzymes [BR:
vat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B7L28_08425
DNA replication proteins [BR:
vat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B7L28_08425
DNA repair and recombination proteins [BR:
vat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B7L28_08425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_22
TIP49
RCF1-5-like_lid
ResIII
AAA_5
AAA_assoc_2
AAA_16
AAA_14
AAA_7
AAA_19
Mg_chelatase
DUF815
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ARF99993
LinkDB
All DBs
Position
complement(1842555..1844993)
Genome browser
AA seq
812 aa
AA seq
DB search
MAYMALYRKYRPQTFTDVVGQHQVSDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFAR
AINCEHGPTDHPCNECSVCKSILSGQSMDVLEIDAASNRGIDEIRALRESVKFMPVEGRK
KVFIIDEAHMLTNEAWNALLKTIEEPPDHVMFIFATTEIEKLPVTIVSRCQRYTFRRITS
DDIAQRLQYVADKEGFALEDNAARLIAVHADGGLRDALSILDQCVGMASGEITPAVVEEL
IGLVSKDWIIKFLAALHNGDGPAVLKYIQNALSEGRDGAQIMEALTQHLRALLIAKVAPD
AEELKVYDSFRTEFLEQAQAIEFGTINQYIKQLQSIMSDAKQVDNPRTVIEMGLLVLCAG
ISKANDDVEERLSALEHSERESREGLLNRLAKLEQQGPPMAAPSINFVSTPNVSRSNVVD
DDFIPPPMEEYESVTIHEVPTNYKPAPTVAESKPSGSNQTAATGLTPPPITGTMPPPMQG
VGMTPPPMKNFGAVPPKTSTSRTTRHTGRQKNTGISQVAVIGETMVDAGEYRTIQTTVIK
YLKDSDKGLAYNIIGQGQVIYVDREKAVVAFKKGISLTLATNEANRKEIALAFQYALGYS
VSLEIVDIETDVYKEYMMASGARSNRAVQPKKAQPTPVVEAPPPPVEADLLDNDETVSST
PIATQDTEEESRATIQSETQDVSGDVKPPEPISSEARNNAREAALAALKARGIKPPSSKG
DEDSSAKKTTTHDDGGIPVMSLDGTQVMTDDGEVIHRPMDSGATVEVEAVPKREYQWDPE
HMGVEEQQNPLLAKTLEKLSEDHDIYVEVIEE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcatatatggcgttatatcgtaagtatcgtccgcagacgtttaccgatgtggttgga
caacatcaggtatcagatacattgatgcgcgccatccgcgaggataaggtggctcatgcg
tatctatttgccggccctcgtgggacaggtaagacgagtatggctaagatttttgcacgt
gccattaattgtgaacatggccctacggaccatccttgtaatgaatgtagcgtatgtaaa
tcgattttgagtggtcaatctatggacgtccttgaaattgatgccgcatcaaatcgtggt
atcgatgagattcgtgctcttcgtgaaagtgtaaaatttatgcctgtagaggggcgtaaa
aaggtattcatcatcgacgaagcccatatgcttaccaatgaagcctggaatgccctatta
aagacgatagaggaaccaccagaccacgtcatgttcatctttgcgaccactgagattgaa
aaattgcctgttaccatcgtatctcgttgccaacgatatacatttagacgtatcacatct
gatgatattgcacagcggttacaatatgttgcagataaagaaggctttgccttagaggat
aatgcagcacgtcttatcgcggttcatgcggatgggggcttgcgcgatgcgttaagtatt
ctagatcaatgtgtgggcatggctagcggcgagattacacctgctgtggtagaggaactc
attggtctcgttagcaaggactggattatcaaattcctagctgccttgcataatggagat
ggcccagccgtattgaaatatattcaaaatgcactcagtgaaggtcgtgatggggctcaa
atcatggaggcccttacgcaacacttacgggctttattgatcgctaaggttgctcccgat
gctgaggaattaaaggtatatgattcgttccgcactgaattcttagaacaagcacaggct
atcgagtttggtaccattaatcaatatatcaaacagttacaatccatcatgagcgatgca
aagcaggtagataacccacggaccgttattgaaatgggattactcgtattatgtgctggt
atttcaaaagcgaatgatgatgtagaagaacgcttatccgccttggaacattcagagcga
gaatctcgcgaagggcttcttaaccgattagccaaattggaacaacaaggcccaccgatg
gcggcgccatctattaattttgtgtctacccctaatgtatcaaggtctaatgtggtagat
gatgactttattccaccacctatggaggaatacgaatctgttacgattcatgaggtgcca
acaaattataagcctgcacctactgtagcggaatcgaaacctagcggtagtaatcaaacg
gctgctacaggtttgacaccgccaccaattacgggaactatgccaccgcctatgcagggt
gttggtatgaccccaccaccgatgaagaatttcggtgcagtaccacctaagactagcacg
tctcgaacgacgagacatacgggacgtcagaagaatacaggtattagccaagtcgctgtt
atcggtgaaaccatggtggatgccggagaatatagaaccattcagactactgtgataaaa
tatctaaaggacagcgataagggattagcatataatattattggtcaaggccaagttatt
tatgtagatcgtgaaaaagcagtagtagcttttaaaaaggggatatcccttaccttggct
actaatgaagcaaatcgcaaggaaattgcattagcgttccaatatgcgttgggctattcc
gtgtctttagagattgttgatatagagacagatgtctataaagaatatatgatggctagt
ggagcacggtctaatcgagctgtacaacctaagaaggcacagcccacaccagttgttgag
gctccgccaccaccggtagaagcagacttacttgataatgatgagacagtatcctctacg
cctatagcgactcaggatactgaagaggaatctagagctactatacaatctgaaacccaa
gatgtatctggtgatgtaaaaccgccagagcctatcagctccgaagctcgtaataatgct
agagaggctgcgttagctgctcttaaagcaagaggtataaaaccaccaagcagtaagggc
gatgaggattcatcagctaagaaaacgacgactcatgatgatggcggtatacccgttatg
agtttagatggaacacaggtaatgaccgatgatggtgaagttatccatcggcctatggat
agcggtgccactgtggaggtagaagccgtcccaaagcgtgaataccagtgggaccctgaa
catatgggcgttgaagaacaacaaaacccactgttggctaaaacattagagaaactttca
gaagaccatgacatatatgtagaggtcatagaagagtaa
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