Veillonella atypica: B7L28_08660
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Entry
B7L28_08660 CDS
T04798
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vat
Veillonella atypica
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vat03400
]
B7L28_08660
Enzymes [BR:
vat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7L28_08660
DNA repair and recombination proteins [BR:
vat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B7L28_08660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ARG00037
LinkDB
All DBs
Position
complement(1904912..1908442)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSITMYYGRAGSGKTRAVYERIRQVIIECPGDPIILLVPEPATYRVERELAEFMPQGGFT
TVRVVGFGRLAYQVYQSIGNVKAQQQSISQLGRTMLLSLVMKRKGAELGLLSQAAKRPEF
SAVLQGLFSEFRSFRIGPDELEFGAQRVSNGVLQKKLQELALCMSAYEEELQLHGQIDGD
PIMDLVHALPQSPLMENCHVFVDGFHWFTPVHFELLYMLFDLAVESVITVDLPADPKRIL
ANTGRHGIFNRSVEILENLHKEYGTKLSFRSFTGHRGTPVLQSLEEKFFHGKHNTTAEHI
PLVSAYNREREADWVARDILSYIESSPNARYRDICIMLRESETYGDTLEKVFTRYGIPHF
GDRQRPMNNHPLGELMTDLLGIVKHSYSRDIMFRLLKTDLTPLTREAVDELENYVLEFGI
DHLQWERDNWSYMRRVTGLSDEEQPDAPRHARVNASRQAIMDILIPWFDFATSSDAHTGA
EWCKHIYRVLEELQVPQRLYEWSLEAERDGDLESKASHEQMYTAVIGFLDEMMVLTDTET
LTLDEMIALLEEALDNVHYSMIPPSLDHVAITTIERAYSQSWPRVYVMGLNQGVFPQNMG
DEGLIKDREREALAEAGIVLAEGALPKAFNENFLLYLAMTRAEQHLTISYAGSNDEGEGL
ESSLVIKRLQSLGFCTSPIEVPFTIQDGTEDEYLWRPYQSLSLLSERWGALFSGVPVSPL
WWGLYNWARHDGAYRPRLEDVSRGIRDNNDVPVIAPELVTGLFLKRGYMSGSVTRLEKYR
QCPFKFYAQYGLKLEPRKVRSFGAPEIGTFLHANLERLGTQLLSEHKQWRDLDETAQQEL
CARVAADILEENRYDEDEKTAYDKAIEERVVRTLQKTVSRLVDWSSRSSFDTMYLEQDFG
RPNGWDSIKVSLGEDRYLRLVGQIDRIDEYNRDGHTYGMVIDYKSGSTSVNAQEIYYGLK
LQLMTYLLALESAYKKHHDQPMTPAAVVYTYVKNPRTPAGEPVSYEEAKALADTNGALNN
KGYFTDDIDMLEKMDKNLLTYKSKGPYVPVRITGKGSIHSGDMKIVKSSGDFDIMCRYTE
SIMADTGSAIGKGEFPIAPYQLNKAIPCSYCDYKTVCRFDNERNQYNYLSALNEANALEK
MRDALNGSSGQTEANADFCESSNTDSSMTGGDDNGR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagtattaccatgtattatggtcgcgctggttccggtaagacccgtgccgtatatgaa
cgcattcggcaggttatcatcgaatgtccaggtgaccctattattttgctcgttccagag
ccagccacctatcgcgtggaacgggaacttgcggaatttatgcctcaaggaggctttacg
acggtccgcgtcgttggctttggccgattggcctatcaggtatatcaatcaatcggcaat
gtaaaggctcagcaacagagtatatctcaattgggtagaaccatgttgctaagccttgtg
atgaaacgaaaaggggctgaattaggcctgttgtcgcaagccgctaaacggccagagttt
tcagcggtattgcaaggtttattttccgagtttcgctcatttcgcattggacctgatgaa
ttagaatttggtgcacagcgcgtgtcaaatggtgtattacagaaaaagctacaggaattg
gcactatgcatgtcggcctatgaagaggaattgcagcttcatgggcagattgatggggac
cctatcatggaccttgttcatgcattgccacagtctccattgatggaaaactgtcatgtc
tttgtcgatggattccactggtttacaccggttcactttgagctgttatatatgctcttt
gatcttgctgtagaatcggtaatcaccgtcgatttaccagctgatcctaaacgtatattg
gctaatacaggtcgtcatggcatctttaatcgctccgttgaaatcttggaaaatctccat
aaggaatatggaacgaaattgtcctttcggtcttttacagggcatagagggacacctgtg
ttgcaatctttagaggaaaaattttttcacggtaagcacaatactacggctgaacatata
ccgcttgtaagcgcctataatcgagaacgcgaagcggattgggtggctcgtgatattctt
tcctatattgaaagcagccctaatgcgcgctatcgcgatatatgtattatgctgcgtgaa
tccgaaacctatggcgatacgttggaaaaggtctttacccgctatggaatacctcatttt
ggagaccgtcaacgacctatgaacaatcatccgctcggagaattgatgacggatttgctt
ggtatcgttaagcatagttatagtcgtgacatcatgtttcgtttattgaaaacggatttg
acacctcttactcgcgaggctgtggatgaattagaaaactacgtgctcgaatttggtatt
gatcatctacagtgggaacgagataactggtcctatatgcgccgtgtaacggggctttca
gacgaagaacaaccggacgcaccgagacatgcgcgcgtgaatgcatcgagacaggccatc
atggatattttgataccttggtttgattttgctacgtctagcgatgcgcatacaggggcg
gaatggtgtaaacatatctacagagtcctcgaagaattacaagtgcctcaacgcctctat
gaatggtccttagaggctgaacgagatggcgatttagaatccaaggccagtcacgagcaa
atgtacactgcggtcatcggattcctcgatgaaatgatggtcctcaccgatacggaaaca
ttgacgttagatgaaatgatagccctcttagaagaggccctcgataatgttcattactcc
atgattcctccgtccctcgatcacgtagcgattaccactatagaacgggcgtacagccaa
tcgtggcctcgggtctatgtgatgggccttaatcaaggtgtattcccacaaaatatgggc
gatgaaggcttaatcaaggatagagaacgggaagcattggctgaggcgggcatcgttctt
gcggaaggcgccttgccgaaggcatttaatgaaaatttccttctttatttagcgatgacg
cgggccgagcagcatttaaccatatcctatgcaggttccaatgatgaaggggaaggactt
gaaagttccctcgtcattaaacggttacaatccctcggtttctgtacgtcccctatagag
gttcctttcaccattcaagacggtacagaagatgaatacttatggcgtccataccaaagt
ctatctctattatctgaacgttggggcgctttgtttagcggagtacctgtgtcaccccta
tggtggggcctctataactgggctcgccatgatggggcctacagaccacgcttagaggac
gtaagccgtggtattcgcgacaataatgatgtacctgttattgcgccggagttagtaact
ggtctgttcctcaaacggggctatatgtctgggtcggtaacgcgtcttgaaaaatatcgt
caatgtccgtttaaattctatgctcaatatggtttaaaattagagcctcgcaaggttcgc
tcctttggggcccctgaaattggtacctttttacatgccaatttggagcggttaggaacg
caactattatccgagcataagcaatggcgtgatttagacgaaacggcgcaacaagaatta
tgtgctcgcgtagcagcggatatattagaagaaaaccgttatgatgaggatgaaaagaca
gcctatgataaggctattgaagagcgcgttgtgagaacattacagaaaacggtatcgcgc
cttgttgattggtctagcaggtcctcctttgatacgatgtatttagaacaggattttgga
cgtcccaatggatgggactctattaaggtatctcttggagaggaccgttatttacgcttg
gtagggcaaattgaccgtattgatgaatataatcgtgatggtcatacgtacggcatggtt
atcgactataaatcgggtagtacatcggttaatgcacaagaaatctattacggtttaaaa
ttacaattgatgacttatctgttggcattagaatcggcttataagaaacaccatgatcaa
ccgatgacaccggccgctgtggtgtatacatatgtaaaaaatccacgaacgccagctggt
gagcctgtgtcctatgaagaggccaaagccttggcggatacaaatggggcccttaataat
aaggggtattttacagatgatatcgacatgttggagaagatggataaaaatttgctcacc
tataagagcaagggcccttatgtgcccgttcgtattacgggaaagggatccattcattct
ggggatatgaaaattgttaaatcctccggcgactttgatattatgtgccgctatacggaa
tcgattatggcggataccggctctgccattggtaagggagaattccccattgctccctat
cagttgaataaggccattccttgttcctactgcgattacaagaccgtgtgtcgctttgat
aatgagcgcaatcaatacaattatttgagcgctctaaatgaggcgaatgcccttgaaaaa
atgcgcgatgccctcaatggttcatctggacagactgaggctaacgctgatttttgtgaa
agttctaataccgatagttctatgacaggaggtgacgataatgggcgttaa
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