Veillonella atypica: B7L28_08975
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Entry
B7L28_08975 CDS
T04798
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vat
Veillonella atypica
Pathway
vat00040
Pentose and glucuronate interconversions
vat01100
Metabolic pathways
vat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B7L28_08975
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B7L28_08975
Enzymes [BR:
vat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B7L28_08975
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5441
Motif
Other DBs
NCBI-ProteinID:
ARG00208
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Position
complement(1971208..1972419)
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AA seq
403 aa
AA seq
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MTFSRGSAESPTFMREVLPKQDGFASVGNGTTGGSNATEQNVFKVTNKKEFVAALKDRKN
TAPKIVLVYGTIDFDTDDTGKPLTMKDYMVDGYDFQQYLETHKPQSTAPKSLKDEQEEKR
KASQKNQSQSITVHVPANTSIIGMDNAKLKGVDLVLDADNIIIRNIRFESPYDYFPAWDP
KDGPEGNWNSQYDSLSIKGGTHIWIDHCSFQDGPETVETYFGRKYEHRDGLLDITNQADY
ITISYSTFENHNKTMLIGNSDSNVADEGKLHVTLHHNYFHNVVQRVPRVRFGQVHMYNNY
FASDTTNGEYAYAYSLGVGKHSQIYAESNVVDIAGKDYTSFVKVFGGKQLTTVNNMFNGK
MIDTFDDTLTAVDWKPELFTTIDPVNEVKENVLHNAGPIKISQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgactttttcgcgaggttcggctgaaagccctacctttatgcgtgaagtcttaccgaaa
caggacggatttgcttctgtaggcaatggtactactggtggctctaatgctacagagcag
aatgtgtttaaagtgacgaataaaaaagaatttgtagcggctcttaaggatagaaaaaat
acggctcctaaaattgtgctagtctatggaaccatagattttgataccgatgatactggt
aaaccattgactatgaaggattacatggtcgatggctatgactttcaacaatatttagaa
actcataagccgcaaagcacagcgcctaagagtttgaaagatgagcaggaagaaaagcgc
aaggcgtcgcaaaagaatcaaagtcagtctattaccgttcatgtgccagccaatacaagt
atcattggcatggacaatgcaaaattaaagggcgtggatttggttcttgatgcggataat
atcatcatacgaaatatacggtttgaatcgccttatgactattttcctgcttgggaccct
aaggatggaccagagggcaattggaattctcagtatgatagtctttccataaaaggtggt
acgcacatttggattgatcattgctcgttccaagatggccctgaaacggtagaaacatac
tttggccgtaaatatgagcatagggatggattactcgatattaccaatcaagcggactat
ataaccatatcctattcaacatttgagaaccacaataaaaccatgttgattggcaacagt
gattcaaacgtagcagatgagggaaaattacatgtaaccttgcatcataactatttccat
aatgtagtgcaacgcgtaccaagagtacggtttggacaggtccatatgtataacaattac
tttgcgtcagatactaccaatggtgaatatgcgtatgcttattctctaggcgttggaaaa
cactcgcaaatctatgctgaaagcaatgtggtggatatagcaggtaaagactatacatcc
tttgtgaaagtatttggaggaaaacaacttactacagttaataatatgtttaacggaaaa
atgattgatacatttgacgatacgttaacagcggtagattggaaaccggagctgtttact
acaatagatcctgtaaatgaagtaaaagaaaatgttttgcataatgcgggaccaattaaa
ataagtcaataa
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