Vibrio anguillarum NB10: VANGNB10_cI0191c
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Entry
VANGNB10_cI0191c CDS
T03657
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VANGNB10_cI0191c (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vau03019
]
VANGNB10_cI0191c (rhlB)
Enzymes [BR:
vau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VANGNB10_cI0191c (rhlB)
Messenger RNA biogenesis [BR:
vau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VANGNB10_cI0191c (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
SNF2-rel_dom
DUF7533
Motif
Other DBs
NCBI-ProteinID:
CDQ49109
UniProt:
A0AAW4AGU5
LinkDB
All DBs
Position
1:complement(225848..227158)
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AA seq
436 aa
AA seq
DB search
MKKTHITEQKFADLGLHPQVVEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKT
LAFLAATFNHLLTTPEHEGRKPTQPRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYG
GESYDKQLSKLQDGVDILIGTTGRIIDFYKQHVFNLNNIQAVVLDEADRMFDLGFIKDIR
FLFRRMPEPKERLNMLFSATLSYRVQELAFEHMHNPEHVVVEPEQKTGHRIQEELFYPSN
EHKMALLQTLIEQDWPDRAIIFANTKHRCDSIWGHLAADGHRVGLLTGDVPQKKREKILE
QFTTGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISFA
CEEYAINLTAIEEYTGHAVPVSDYDASALIEDLPPPIRLRSRNPQQRRTNNNGPRTGNRK
PQSRRPRQPHQSNKGS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacacatatcacagagcaaaagttcgccgatttgggattacatcctcaagtt
gttgaaggattggaaaaaaaagggttcgattactgtaccccgatccaagccttggcgttg
ccggtactgctcaccggccaagacattgcaggccaggcccaaacagggactggtaaaacg
cttgcgtttctcgctgctacttttaaccacttactaacaacccctgaacatgaagggcga
aaaccgacgcagccgcgtgccattattatggccccgactcgtgagttagcgattcaaatt
tataacgacgccgaacctctgattgccagtactggtatcaaagctgcgctggcttacggt
ggtgaaagctacgataagcagttgtctaaactgcaagatggtgtcgacatattgatcggt
acaacaggacgtatcatcgatttctacaaacaacacgtgtttaacttgaataatattcaa
gcagttgtgctagatgaagctgatcgcatgtttgaccttggttttatcaaggacattcgt
tttctgtttcgccgtatgccagaacctaaagagcgcctgaacatgctgttttcagccacg
ctttcttatcgcgttcaagagttggcgttcgagcacatgcataaccctgagcacgtggtt
gttgaaccagaacaaaaaactggccatcgcatccaagaagagctgttctacccgtccaac
gaacataagatggcgctattacagacactgatagaacaagactggccagatcgcgccatc
atttttgccaacacaaaacaccgctgcgactctatttggggtcatttagctgcagatggg
caccgtgtcggcttgctaacgggcgacgtaccacagaagaaacgtgaaaagatccttgag
caattcactaccggtgatgtcgacattcttgttgcaaccgacgtggcagcgcgaggctta
cacattcctcaagtcacacacgtattcaactacgacttacctgatgactgtgaagactac
gtgcaccgcattggtcgtacaggtcgcgcaggagagagtggtcactcgattagttttgcc
tgtgaagagtacgccattaacctaaccgcgattgaagagtataccgggcacgcggttcct
gtttctgattacgatgcatcggcgttgattgaagacttaccaccgccaattcgtctgcgt
tctcgtaatcctcagcagcgccgtactaataacaatggccctcgtactggcaaccgtaag
ccacaaagtcgtcgcccacgtcaaccgcatcaaagtaataagggttcgtaa
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