Vibrio anguillarum NB10: VANGNB10_cI0494c
Help
Entry
VANGNB10_cI0494c CDS
T03657
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VANGNB10_cI0494c (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vau03019
]
VANGNB10_cI0494c (pcnB)
Enzymes [BR:
vau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
VANGNB10_cI0494c (pcnB)
Messenger RNA biogenesis [BR:
vau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VANGNB10_cI0494c (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CDQ49409
LinkDB
All DBs
Position
1:complement(581651..583042)
Genome browser
AA seq
463 aa
AA seq
DB search
MAKTNYCQMHMNKNDYTPRENRVYQDLALNIITRDEHNISRKQISDNALKVLYRLHGAGF
DAYLVGGGVRDLLLGETPKDFDIATNATPEQIRQQFRNCRLIGRRFRLAHIMFGRDVVEV
ATFRGHHQEPSQNVSAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIGDYSIHDYAG
GMDDLEDKLIRLIGDPETRYREDPVRMLRAIRFAAKLDFDIEEETADPIEHLAPLLQDIP
AARLYEESLKMLQTGHGLETYHLMREYNLFQQLFPVIAQEFTPDYDSHTEQMLDLVLDST
DLRIEEGKRINPAFMFAAMFWYPTVKLADALMQQRNFAYYDAVMEASNLILDQVVKTLAI
PRRHTATIREIWQLQLRLPRRNGKRAFRLMELNKFRAGFDFLQMRGEIEGGETKKLADWW
TTFESAGRDMRQAMANDLESGASNKPNVRRRRSPRNKKSRPES
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaccaattattgccagatgcacatgaataaaaacgactatacaccacgcgaa
aatcgcgtttaccaagacttagctctaaatattatcactcgtgatgaacacaatatttcg
cgcaagcaaatcagcgataatgcgctcaaggtgctataccgacttcatggcgcaggtttt
gacgcctatttagtcggtggtggagtacgcgacctactattaggtgagacaccaaaagat
tttgatatcgccactaatgcaacaccagagcaaatacgccaacagtttcgcaactgccgc
ttgatcggccgtcgctttcgcttagcgcacatcatgtttggccgcgacgtagtggaagtg
gcgactttccgtggacaccatcaagagccgagccaaaacgtctcagcacaatctgaagcg
ggtatgctactgcgtgataacgtctacggcaccattgatgaagatgcagaacgccgggac
ttcacgattaacgccatgtattacaacatcggtgattacagcattcatgattatgctggc
ggcatggacgacttagaagataagctcatccgcttaattggcgatcctgaaacgcgctac
cgtgaagacccagtgcgcatgttgcgtgcgattcgttttgcggccaagctcgatttcgat
atcgaagaagagactgccgacccaatcgaacatcttgctcctttactgcaagatattcct
gcggcacgtttgtacgaagaatcgctaaagatgctgcaaactggccacggtttagaaacc
taccacttaatgcgtgagtacaacctgttccagcagttgttccctgtgatagctcaagag
ttcactccagactacgactcgcacacagaacagatgttggatctggtcttagactcaacc
gacctgcgtattgaagaaggtaaacgcatcaacccagccttcatgtttgcggccatgttc
tggtacccgacagtgaaactggctgatgcgttaatgcagcagcgtaatttcgcctattac
gacgccgtcatggaagcgagtaacctcatccttgaccaagtggtgaaaacccttgcgata
cctcgtcgtcataccgcgacaattcgcgaaatttggcaattgcagttgcgcttaccacgt
cgcaatgggaaacgcgccttccgccttatggagctcaacaaattccgagcgggttttgat
tttctacaaatgcgtggcgagatcgaaggcggagagacgaagaagctggctgactggtgg
acaacctttgaaagcgccgggcgggatatgcgccaagcgatggcaaatgatttggaaagt
ggcgcaagtaacaaacccaatgtacgccgccgcagaagcccacgtaataaaaagagccgc
ccagaatcatga
DBGET
integrated database retrieval system
