Vibrio anguillarum NB10: VANGNB10_cI0498
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Entry
VANGNB10_cI0498 CDS
T03657
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vau03019
]
VANGNB10_cI0498 (hrpB)
Enzymes [BR:
vau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VANGNB10_cI0498 (hrpB)
Messenger RNA biogenesis [BR:
vau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VANGNB10_cI0498 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
CON_HrpB
DEAD
GlutR_dimer
Motif
Other DBs
NCBI-ProteinID:
CDQ49413
UniProt:
A0AAW4AUE6
LinkDB
All DBs
Position
1:585464..587932
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AA seq
822 aa
AA seq
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MSQLPIQAVMPELLAGVQAHPQMIVKAAPGAGKSTHFPLQLLKAQLFTGKIIMLEPRRLA
ARSIACYLAQQLGESVGQTVGYRMRGESKVSAATQLEIVTEGIMTRMIQTDPELSGIDLL
IFDEYHERSIHADTALALSLEVQSALREDLKIVVMSATLDQLALQSLLPQALYVQSEGRA
YPVEVRYAPLRANDYLVPTMSKQIEGLMRAESGSLLAFLPGVSAIKQLEQQLAHLADEFD
ICPLYGQLSLQAQQKAIAPAVAGKRKIVLATNIAETSLTIEGIRLVVDAGLERIAKFDLK
TGITRLEQVKIAQSSAQQRTGRAGRLESGICLRLYSEAQYKQQPQVPSAEILHSDLAPLA
MELAQWGVVSVNDLPWLDTPPPAAMQQAWSLLHTLGLMDSKQQLSALGKKAQSLGVEPRL
VSMLLKAHETSDSMLNTALAVTALLEEPERNVLDLQHSLMRWQQATHPKTQNLHQRATTL
ARALGGQFQLTQVDESLLALVLSLAFPDRIAQRRSESQRGQFLLANGHGAQMRDDERLAG
AHYLVVVDLMRSGSQASQIFVATELDIDALQAHFPELFSTQERVDWDEKAGKLCAERLTL
CGKLVIEREALQEPAHEKMTQALLNYVRRKGLSVLQWSEAAGALLTRIRCAAQWLPEAAW
PAVEEQALLDDLEIWLAPYLVGVKSVKALAKVPLFDALNAYLGWPLNQEIDRWLPTHHPL
PTGNRAAIRYQLGAEPMLSVRMQEMFGEQDSPTIAQGRKKVVMELLSPAQRPLQVTQDLA
GFWQGAYKEVQKEMKGRYPKHVWPDDPANHIATTKTKRQLAQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacaattgcccattcaagctgtgatgcccgagctgctggcgggagtacaagctcac
ccacagatgattgtcaaagccgctcctggcgcgggtaagtcgacccatttcccgttacag
ctattaaaagcgcaattattcacgggtaagatcatcatgcttgaaccgcgtcgtttggcg
gcgcgcagtattgcttgctatttagcacagcaattaggtgagagtgttgggcaaaccgtc
ggctatcgtatgcgtggtgagagtaaagtcagcgcagcgacacagcttgaaattgtgaca
gaagggatcatgacacgtatgatccaaaccgatcctgagctaagcggaatcgatctcttg
atcttcgatgagtatcacgagcggagtattcacgcggatacggctctcgcattgagtttg
gaagtgcaatcagcgctgcgagaagatcttaaaatcgtcgtaatgtcggcaaccttagat
caactggcattgcagtcattattaccccaagcactttatgtgcaatctgaaggtcgcgct
tatccggttgaagtgcgctatgcaccgctgcgagccaatgattatcttgtgccgacgatg
agcaaacagattgaaggcttgatgcgagctgaaagtggctctctgctggcttttttacct
ggcgtttcagccattaaacagcttgaacagcagctcgcacacttagccgatgagtttgat
atttgtcctttatacgggcagttgagtctacaagcgcagcaaaaagcgattgcgcctgca
gtagcaggcaaacggaaaattgtgctagcgactaatattgccgaaacatcgctgaccatt
gaggggatacgcttagtggtggatgcagggctagagcggatagcgaagtttgatcttaaa
acgggcatcactcgtttagagcaagtgaaaattgcccagtcatcggcgcagcaacgcacg
gggcgcgccggacgcctagaatctggcatctgtttgcgcctttacagcgaagcacaatat
aagcagcaaccccaagtgccgagcgcggaaatattgcacagtgacttagcgcctttggcg
atggagcttgcgcagtggggtgtggtgtcggtcaacgatttgccttggctggatacacca
ccaccagcagcgatgcagcaagcttggagtctattgcatacgcttggtttgatggacagc
aaacagcagctcagcgcattgggtaaaaaagcgcagtcactcggtgtggaaccaaggctg
gtgagtatgctgctcaaagcccatgaaacgagtgattcaatgctcaatacggcgctcgct
gtgaccgctttattagaagagcctgagcgtaatgtgctggatttacaacatagcttaatg
cgttggcagcaagcgactcaccctaaaacacaaaacctacatcagcgtgccacgacgctt
gcgcgcgcactcggtggccaatttcagctaacacaagtagatgaatcattgttggcgtta
gtgctgagtttggcttttcccgatcgcattgcccagcgtcgcagcgagtcgcaacgggga
cagtttttactggcgaatggtcacggcgcacaaatgcgtgatgatgaacgcctcgcgggc
gcgcactatttagtggtggtggatttaatgcgcagcggctcacaagcgagccaaatcttt
gttgcgacagagttggatattgatgcactgcaagcccatttcccagagctatttagtaca
caagaacgagtcgattgggatgagaaagcagggaaactgtgcgcggaaaggctaaccctg
tgcggtaaattggtcattgagcgtgaagcactgcaagagcctgctcatgaaaaaatgacg
caagccttgctcaattatgtccgtcgcaaggggctatcggtattacagtggagcgaagcg
gcgggcgctttattaacgcgcatacgctgcgctgcgcaatggctaccggaagcggcgtgg
cctgctgtcgaggaacaagcgctgcttgatgatcttgaaatttggttagccccctattta
gtcggagtaaaatcggtcaaagcgttagcgaaagtaccgctttttgatgcgctcaatgcc
tatttaggttggccattaaaccaagagattgatcgctggcttccaactcaccacccgcta
cccacaggtaatcgagccgccattcgttatcaactgggcgcggagccgatgctgtcggtc
cgtatgcaggagatgtttggcgagcaagattcccctaccatcgctcaagggcgaaaaaaa
gtggtgatggaactgctctcacctgcgcagcggcctttgcaggtaactcaagatctcgcc
ggtttctggcagggcgcttataaagaagtgcaaaaagagatgaaagggcgttacccaaaa
cacgtttggcctgatgatcctgccaaccacatagcgacgacgaaaactaagcggcaatta
gcacaatga
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