Vibrio anguillarum NB10: VANGNB10_cI0818
Help
Entry
VANGNB10_cI0818 CDS
T03657
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau00260
Glycine, serine and threonine metabolism
vau00460
Cyanoamino acid metabolism
vau00630
Glyoxylate and dicarboxylate metabolism
vau00670
One carbon pool by folate
vau00680
Methane metabolism
vau01100
Metabolic pathways
vau01110
Biosynthesis of secondary metabolites
vau01120
Microbial metabolism in diverse environments
vau01200
Carbon metabolism
vau01230
Biosynthesis of amino acids
vau01240
Biosynthesis of cofactors
vau04981
Folate transport and metabolism
Module
vau_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VANGNB10_cI0818 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VANGNB10_cI0818 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VANGNB10_cI0818 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VANGNB10_cI0818 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VANGNB10_cI0818 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VANGNB10_cI0818 (glyA)
Enzymes [BR:
vau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VANGNB10_cI0818 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CDQ49732
UniProt:
A0AAW4AKQ5
LinkDB
All DBs
Position
1:965416..966666
Genome browser
AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDADLFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVETLAIERACELFGADYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDAKGQINYEEMEALAVEHQPKMIIGGFSAYSQV
CDWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQKRVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKNITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGSPSITRRGFTEADAKALAGWMCDILDNMGDESVIQATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggacctgttcgcagctattcaa
gaagagactcttcgtcaggaagaacacattgaacttatcgcttcggaaaactacacaagt
ccacgtgtaatggaagcgcaaggttcacagctcaccaataaatacgctgaaggttaccca
ggtaaacgctattacggtggttgtgagtttgtcgataaagtagaaacactggcgattgaa
cgtgcgtgtgaactgtttggcgcagactatgcgaacgtgcagccgcattctggctcacaa
gcaaacaacgcggtttatatggcgttgcttaacgcaggtgataccgtattaggaatgagc
ttggcacacggtggtcatttgactcacggttctcctgtcaacttttccggtaagctgtac
aacatcattccttatggcattgatgcaaaaggtcaaattaattacgaagagatggaagca
ttagcggttgagcatcagccaaaaatgatcatcggtggcttctctgcttattcacaagtt
tgcgactggaaaagaatgcgtgaaattgctgataaagtgggcgcttacttgtttgttgat
atggcgcatgtagctggtttgattgcggcgggtgtttaccctaacccagttcctcatgcc
cacgtagtgacgaccactacccacaaaacactggcaggtcctcgtggtggccttattctt
tcgaatgcaggtgaagacttatataagaagcttaactcagccgtattccctggtggtcaa
ggtggtcctttaatgcacgttatcgcaggtaaagcggtcgcgttcaaagaagctctagaa
ccagagttcaaagagtatcaaaaacgcgttgtcgccaatgcgaaagcgatggtggccgag
tttttggctcgtggttacaacattgtttcaggttccacagaaaatcacctgttccttgtc
gatttgatcgataaaaatattacaggtaaagatgctgatgcggcattgggtgcggctaac
attacagtgaacaaaaactctgtaccgaacgatccgcgtagcccatttgtcacctctggc
atccgcgtgggttctccatcaattactcgccgtggttttactgaagctgatgcgaaagca
ctagctggatggatgtgtgatattttggacaacatgggtgatgaatctgttattcaagca
acgaaggcaaaagtgttagaaatttgtaagcgtttgcctgtatacgcgtag
DBGET
integrated database retrieval system