Vibrio anguillarum NB10: VANGNB10_cI0829c
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Entry
VANGNB10_cI0829c CDS
T03657
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03030
DNA replication
vau03430
Mismatch repair
vau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VANGNB10_cI0829c (holA)
03430 Mismatch repair
VANGNB10_cI0829c (holA)
03440 Homologous recombination
VANGNB10_cI0829c (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vau03032
]
VANGNB10_cI0829c (holA)
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI0829c (holA)
Enzymes [BR:
vau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VANGNB10_cI0829c (holA)
DNA replication proteins [BR:
vau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VANGNB10_cI0829c (holA)
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VANGNB10_cI0829c (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
CDQ49743
UniProt:
A0AAW4AWZ1
LinkDB
All DBs
Position
1:complement(975417..976442)
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AA seq
341 aa
AA seq
DB search
MRIFADKLADHLNKPLMGLYLLFGNEPLLLQESRVAIEKKALEQGFEERHRFSADAHLNW
DQVYDCCQALSLFSSKKIIEIELPETGANAATAKELVALGQSLHPDVLLVIIGEKLTKAQ
ESTKWFKTLSSLGCWVSCLTPDISKLPQFVMMRCRALGLKPDQEAVQMLAQWHEGNLFAL
SQSLEKLALLYPDGLLTLIRLEESLSRHNHFTVFHWVDALLEGQANRSQRILRQLITEGT
EPVILIRSLQKELLLLLQMHQDLTQMPIGSIFDKYRIWQSKRPWYAASLKRLSRDKLKQL
IALLTQAERVTKTQYETSTWPILQQISVEFCLPQSVVSKLA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatttgctgacaagctggccgatcacttaaacaagcccttgatggggctttac
ttactgtttggcaacgaaccgctattgctgcaagaatcacgcgtggcgatagagaaaaaa
gcgttagaacaaggatttgaagaacgccatcgtttcagtgccgatgcccatttaaactgg
gatcaagtctatgactgctgccaagctttaagtttattttccagcaaaaaaatcattgaa
attgaattacctgaaacgggtgcaaatgcggcaacagcgaaagagctcgtcgccctaggt
caatcgcttcatcctgacgtactacttgtgattatcggtgagaaattaaccaaagcacaa
gaaagcactaaatggtttaagacactctcaagcctaggatgttgggtgagttgcttaacc
ccggatatcagcaaactgccacaatttgtcatgatgcgctgccgcgcattggggctaaaa
cctgatcaagaagcagtgcagatgctggcgcaatggcatgaaggcaatctgttcgcacta
tctcaaagcttagaaaaactcgcgctactctatccagatggcttactgacgctgatccgc
ttagaagagtcattaagccgacataaccacttcaccgtctttcactgggtcgatgcgctg
ctcgaagggcaagcgaatcggtcacaacgtattttacgccagctcattaccgaaggcact
gagcctgtgattctgatacgtagcctacaaaaagagctgctactgctgctgcaaatgcat
caagatttaacccagatgccgattggctcaatctttgataagtatcgaatttggcaatcc
aagcgaccttggtacgcggcaagcttaaaaagactatcgagagataaactcaaacagctg
attgcattactcacccaagccgaaagagtaactaaaactcagtatgaaacctcaacttgg
ccaatattgcagcaaatcagtgttgaattttgcttgccacagtccgttgtatcaaagttg
gcttga
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