Vibrio anguillarum NB10: VANGNB10_cI0925c
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Entry
VANGNB10_cI0925c CDS
T03657
Symbol
aphB
Name
(GenBank) Transcriptional regulator AphB
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vau
Vibrio anguillarum NB10
Pathway
vau05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VANGNB10_cI0925c (aphB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vau03000
]
VANGNB10_cI0925c (aphB)
Transcription factors [BR:
vau03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VANGNB10_cI0925c (aphB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
CDQ49839
UniProt:
A0AAW4AJQ8
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Position
1:complement(1101150..1102025)
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSLNLRLLNRHARKLSLTEA
GERFFQECSPLLHRLAATAEELTDECRGASGKLRISSPSNVTKRMMMPIFNAFMMQYPDI
NIELTTSNQADQLDPTEWDVIFRVGPQRDSSLIARKINEVKDVLVASPGYLAKHPAPTHA
EELSNHSLLKGYPLVKWQLTNNKGECVVNCDTGRFQANALNVVRSACSEGLGITLMPDVM
IKEFIEEGSLVRVLEDWVSNPRDIYMLYNHKDHLPEKVRLFIDFVIAYHIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgacctaaacctctttcgactggttgtcgaaaatggaagctataccgca
acttctcgtaaaacaatgatccccgttgcgaccattacccgacgcattcaagcattggaa
gattctctgaatcttaggttgttgaatcgccatgctcgaaaactttcgctgactgaagcg
ggtgaacgtttttttcaagagtgctcaccgttgctgcatcgcttagctgcaacagcagaa
gagctcaccgatgaatgtcgtggcgcttcaggcaaactaagaatatcgtcaccatctaat
gtcacgaaacgcatgatgatgcctatcttcaatgccttcatgatgcagtacccagatatc
aacatagaactgaccaccagcaatcaggccgatcaactcgacccaaccgaatgggatgtc
atttttagagttggccctcaacgagactccagtttgattgcgcgaaaaattaatgaagtg
aaagatgtgttagtcgcaagcccagggtatttagcgaaacaccctgcaccaactcatgcc
gaagagctcagtaatcattcattattgaagggatatcctctagtaaaatggcagctgacc
aacaataaaggggaatgcgtggtcaattgtgatactggtcgttttcaggccaacgcttta
aacgtagtgcgcagcgcttgctctgaggggctgggtatcaccttaatgccagacgtgatg
attaaagaatttatcgaagaaggcagcttagtcagagtactggaagactgggtttccaac
cctcgtgatatttatatgctgtacaaccacaaggatcatctacctgaaaaagtcaggcta
tttattgattttgtgattgcctatcacatccactag
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