KEGG   Vibrio anguillarum NB10: VANGNB10_cI0984
Entry
VANGNB10_cI0984   CDS       T03657                                 
Symbol
hupB?
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
vau  Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:vau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vau03032]
    VANGNB10_cI0984 (hupB?)
   03036 Chromosome and associated proteins [BR:vau03036]
    VANGNB10_cI0984 (hupB?)
   03400 DNA repair and recombination proteins [BR:vau03400]
    VANGNB10_cI0984 (hupB?)
DNA replication proteins [BR:vau03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    VANGNB10_cI0984 (hupB?)
Chromosome and associated proteins [BR:vau03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    VANGNB10_cI0984 (hupB?)
DNA repair and recombination proteins [BR:vau03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      VANGNB10_cI0984 (hupB?)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 ACP_syn_III_C Arteri_nsp7a GTP_EFTU_D2 HU-CCDC81_euk_1 VWA_2 DUF7342 Nup214_FG
Other DBs
NCBI-ProteinID: CDQ49898
UniProt: A0A191W301
LinkDB
Position
1:1170329..1170601
AA seq 90 aa
MNKTQLVEKIAENADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPAFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaaacacaattagtagaaaaaatcgcagaaaacgctgacatctctaaagcatcg
gcaggccgtgctcttgatgcattcatcgaagccgttagtggcactcttcaatctggcgat
caagtagcgcttgttggctttggtacatttagcgttcgcactcgtgcagcgcgcacgggt
cgtaaccctaaaacgggtgaagagatccaaatcgcagaagcaaaagtacctgctttcaaa
gcaggcaaagcgcttaaagacgcttgcaactaa

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