Vibrio anguillarum NB10: VANGNB10_cI0984
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Entry
VANGNB10_cI0984 CDS
T03657
Symbol
hupB?
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vau03032
]
VANGNB10_cI0984 (hupB?)
03036 Chromosome and associated proteins [BR:
vau03036
]
VANGNB10_cI0984 (hupB?)
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI0984 (hupB?)
DNA replication proteins [BR:
vau03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VANGNB10_cI0984 (hupB?)
Chromosome and associated proteins [BR:
vau03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VANGNB10_cI0984 (hupB?)
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VANGNB10_cI0984 (hupB?)
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
GTP_EFTU_D2
HU-CCDC81_euk_1
VWA_2
DUF7342
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
CDQ49898
UniProt:
A0A191W301
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All DBs
Position
1:1170329..1170601
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AA seq
90 aa
AA seq
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MNKTQLVEKIAENADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPAFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaacacaattagtagaaaaaatcgcagaaaacgctgacatctctaaagcatcg
gcaggccgtgctcttgatgcattcatcgaagccgttagtggcactcttcaatctggcgat
caagtagcgcttgttggctttggtacatttagcgttcgcactcgtgcagcgcgcacgggt
cgtaaccctaaaacgggtgaagagatccaaatcgcagaagcaaaagtacctgctttcaaa
gcaggcaaagcgcttaaagacgcttgcaactaa
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