Vibrio anguillarum NB10: VANGNB10_cI0989
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Entry
VANGNB10_cI0989 CDS
T03657
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vau03032
]
VANGNB10_cI0989 (ihfB)
03036 Chromosome and associated proteins [BR:
vau03036
]
VANGNB10_cI0989 (ihfB)
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI0989 (ihfB)
DNA replication proteins [BR:
vau03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VANGNB10_cI0989 (ihfB)
Chromosome and associated proteins [BR:
vau03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
VANGNB10_cI0989 (ihfB)
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VANGNB10_cI0989 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HAAS
HU-CCDC81_euk_1
DUF4777
Glycos_trans_3N
HU-DNA_bdg
DUF7799
Motif
Other DBs
NCBI-ProteinID:
CDQ49903
UniProt:
A0A191W309
LinkDB
All DBs
Position
1:1175755..1176039
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AA seq
94 aa
AA seq
DB search
MTKSELIERLCAEKTHLSAKEIEDAVKDILEHMASTLESGERIEIRGFGSFSLHYREPRV
GRNPKTGDKVVLDGKFVPHFKPGKELRERVNENI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtctgaattgatagaaagactctgtgctgagaaaacgcacctatctgctaaa
gaaattgaagacgctgtgaaagatattcttgaacatatggcatcaactttagaaagcgga
gagcgaatcgaaattcgcggatttggtagtttctctttgcactatcgtgagcctagagta
ggtcgtaatcctaaaaccggtgataaagtggtgttggatggcaaattcgtccctcatttc
aagccaggtaaagagttacgtgagcgagttaatgagaatatctaa
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